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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170317310
CESP01142281
165001
Bacteroidota
GTT
Asn
>WENV170317468
CESP01159259
165001
Bacteroidota
GTT
Asn
>WENV170316921
CESP01095400
237360
Bacteroidota
TTT
Lys
>WENV170316945
CESP01098499
236125
Bacteroidota
GAA
Phe
>WENV170316207
CESP01023423
127458
Bacteroidota
GAC
Val
>WENV170317350
CESP01148331
127458
Bacteroidota
GAC
Val
>WENV170317379
CESP01151352
127458
Bacteroidota
GAC
Val
>WENV170316513
CESP01049897
364423
Bacteroidota
GGT
Thr
>WENV170316234
CESP01025178
270933
Bacteroidota
CAT
Met
>WENV170316395
CESP01038891
241469
Bacteroidota
GAA
Phe
>WENV170316088
CESP01012733
127288
Bacteroidota
TGG
Pro
>WENV170317147
CESP01120954
127414
Bacteroidota
TGG
Pro
>WENV170317127
CESP01118316
127414
Bacteroidota
TGG
Pro
>WENV170316423
CESP01041262
127414
Bacteroidota
TGG
Pro
>WENV170316309
CESP01030422
127414
Bacteroidota
TGG
Pro
>WENV170316552
CESP01054551
44938
Bacteroidota
TGA
Ser
>WENV170317440
CESP01156574
17987
Bacteroidota
GGA
Ser
>WENV170317170
CESP01122726
17987
Bacteroidota
GGA
Ser
>WENV170317761
CESP01228908
162699
Bacteroidota
TCT
Arg
>WENV170317510
CESP01161457
95727
Bacteroidota
TAG
Leu
>WENV170317633
CESP01166107
235802
Bacteroidota
CAT
Met
>WENV170316337
CESP01033041
80676
Bacteroidota
GTA
Tyr
>WENV170317494
CESP01160638
246641
Bacteroidota
GAA
Phe
>WENV170316858
CESP01088537
246641
Bacteroidota
GAA
Phe
>WENV170316505
CESP01049084
246641
Bacteroidota
GAA
Phe
>WENV170316373
CESP01035882
246641
Bacteroidota
GAA
Phe
>WENV170316853
CESP01087959
165044
Bacteroidota
GTG
His
>WENV170317454
CESP01157945
145555
Bacteroidota
GTC
Asp
>WENV170317141
CESP01119400
145555
Bacteroidota
GTC
Asp
>WENV170316351
CESP01034173
145555
Bacteroidota
GTC
Asp
>WENV170317521
CESP01162088
240901
Bacteroidota
TTT
Lys
>WENV170317038
CESP01108170
48382
Bacteroidota
TGA
Ser
>WENV170317585
CESP01164889
127449
Bacteroidota
TAC
Val
>WENV170316868
CESP01089189
48914
Bacteroidota
TGA
Ser
>WENV170316466
CESP01045857
48914
Bacteroidota
TGA
Ser
>WENV170316909
CESP01093573
127216
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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