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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170329008
CESV01067092
413342
Bacteroidota
TTC
Glu
>WENV170330757
CESV01372437
277731
Bacteroidota
>WENV170329360
CESV01105201
18310
Bacteroidota
GGA
Ser
>WENV170328584
CESV01026782
165596
Bacteroidota
GGC
Ala
>WENV170328831
CESV01050843
260563
Bacteroidota
>WENV170330538
CESV01333038
369213
Bacteroidota
GCC
Gly
>WENV170328385
CESV01010304
162224
Bacteroidota
GGG
Pro
>WENV170330712
CESV01369930
184180
Bacteroidota
GTC
Asp
>WENV170329068
CESV01073597
139505
Bacteroidota
TAC
Val
>WENV170329126
CESV01080055
139505
Bacteroidota
TAC
Val
>WENV170329171
CESV01083521
139505
Bacteroidota
TAC
Val
>WENV170329368
CESV01106723
220163
Bacteroidota
TCT
Arg
>WENV170330531
CESV01331078
64800
Bacteroidota
GAG
Leu
>WENV170328456
CESV01016080
116954
Bacteroidota
TAG
Leu
>WENV170330075
CESV01185817
139484
Bacteroidota
TAC
Val
>WENV170328790
CESV01046458
211884
Bacteroidota
TGC
Ala
>WENV170328723
CESV01039942
57357
Bacteroidota
TGA
Ser
>WENV170329014
CESV01067842
57357
Bacteroidota
TGA
Ser
>WENV170329848
CESV01168668
57357
Bacteroidota
TGA
Ser
>WENV170330259
CESV01192176
57357
Bacteroidota
TGA
Ser
>WENV170328651
CESV01032230
160349
Bacteroidota
GTG
His
>WENV170329669
CESV01148019
160349
Bacteroidota
GTG
His
>WENV170330508
CESV01321750
160349
Bacteroidota
GTG
His
>WENV170329003
CESV01066776
50342
Bacteroidota
TGA
Ser
>WENV170328696
CESV01036663
200621
Bacteroidota
TGT
Thr
>WENV170328614
CESV01028650
282364
Bacteroidota
TTT
Lys
>WENV170329051
CESV01071566
263627
Bacteroidota
TTG
Gln
>WENV170329480
CESV01121107
138908
Bacteroidota
TGG
Pro
>WENV170328298
CESV01002768
49783
Bacteroidota
TGA
Ser
>WENV170328691
CESV01035956
49783
Bacteroidota
TGA
Ser
>WENV170328323
CESV01004850
177164
Bacteroidota
GTC
Asp
>WENV170329899
CESV01172920
143948
Bacteroidota
TGG
Pro
>WENV170329093
CESV01075890
188048
Bacteroidota
GGC
Ala
>WENV170329532
CESV01128850
188048
Bacteroidota
GGC
Ala
>WENV170330221
CESV01191534
188048
Bacteroidota
GGC
Ala
>WENV170329907
CESV01173216
257687
Bacteroidota
TTT
Lys
>WENV170329963
CESV01177067
257687
Bacteroidota
TTT
Lys
>WENV170328528
CESV01022318
164620
Bacteroidota
GTG
His
>WENV170329712
CESV01153573
144149
Bacteroidota
TGG
Pro
>WENV170328647
CESV01031731
263162
Bacteroidota
GGG
Pro
>WENV170330046
CESV01183973
263162
Bacteroidota
GGG
Pro
>WENV170328288
CESV01002152
321470
Bacteroidota
GAA
Phe
>WENV170329258
CESV01092869
321470
Bacteroidota
GAA
Phe
>WENV170330328
CESV01193609
321470
Bacteroidota
GAA
Phe
>WENV170328492
CESV01018807
168483
Bacteroidota
GTT
Asn
>WENV170328770
CESV01045110
263886
Bacteroidota
TTG
Gln
>WENV170328924
CESV01059952
263886
Bacteroidota
TTG
Gln
>WENV170329646
CESV01144544
263886
Bacteroidota
TTG
Gln
>WENV170328538
CESV01022873
310118
Bacteroidota
CCA
Trp
>WENV170328742
CESV01042733
310118
Bacteroidota
CCA
Trp
>WENV170328846
CESV01052142
310118
Bacteroidota
CCA
Trp
>WENV170329280
CESV01095834
310118
Bacteroidota
CCA
Trp
>WENV170329315
CESV01099748
310118
Bacteroidota
CCA
Trp
>WENV170329316
CESV01099749
310118
Bacteroidota
CCA
Trp
>WENV170330203
CESV01191153
310118
Bacteroidota
CCA
Trp
>WENV170330308
CESV01193314
310118
Bacteroidota
CCA
Trp
>WENV170329125
CESV01080001
23145
Bacteroidota
GGA
Ser
>WENV170329744
CESV01157530
106218
Bacteroidota
CAA
Leu
>WENV170329769
CESV01160071
18750
Bacteroidota
GGA
Ser
>WENV170329892
CESV01171961
18750
Bacteroidota
GGA
Ser
>WENV170328464
CESV01016577
301008
Bacteroidota
TTG
Gln
>WENV170329109
CESV01077955
301008
Bacteroidota
TTG
Gln
>WENV170330051
CESV01184203
301008
Bacteroidota
TTG
Gln
>WENV170330425
CESV01269685
89123
Bacteroidota
GCT
Ser
>WENV170328355
CESV01006453
68352
Bacteroidota
GCT
Ser
>WENV170329478
CESV01120967
68352
Bacteroidota
GCT
Ser
>WENV170329114
CESV01078989
139231
Bacteroidota
GAC
Val
>WENV170329651
CESV01145147
139231
Bacteroidota
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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