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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170328543
CESV01023360
165001
Bacteroidota
GTT
Asn
>WENV170330040
CESV01183261
165001
Bacteroidota
GTT
Asn
>WENV170329712
CESV01153573
139286
Bacteroidota
TGG
Pro
>WENV170329258
CESV01092869
306609
Bacteroidota
GAA
Phe
>WENV170330328
CESV01193609
306609
Bacteroidota
GAA
Phe
>WENV170328357
CESV01007097
308806
Bacteroidota
TCC
Gly
>WENV170329899
CESV01172920
137224
Bacteroidota
TGG
Pro
>WENV170328875
CESV01056404
430187
Bacteroidota
GCA
Cys
>WENV170330079
CESV01186048
99288
Bacteroidota
TAG
Leu
>WENV170328614
CESV01028650
238872
Bacteroidota
TTT
Lys
>WENV170329578
CESV01133957
145683
Bacteroidota
TGC
Ala
>WENV170329651
CESV01145147
127458
Bacteroidota
GAC
Val
>WENV170329114
CESV01078989
127458
Bacteroidota
GAC
Val
>WENV170328347
CESV01006059
364423
Bacteroidota
GGT
Thr
>WENV170330106
CESV01187319
60611
Bacteroidota
GCT
Ser
>WENV170329679
CESV01149835
60611
Bacteroidota
GCT
Ser
>WENV170330681
CESV01367381
126641
Bacteroidota
TAC
Val
>WENV170329041
CESV01070329
322068
Bacteroidota
TCC
Gly
>WENV170329038
CESV01070103
135906
Bacteroidota
TAC
Val
>WENV170328956
CESV01062612
135906
Bacteroidota
TAC
Val
>WENV170328658
CESV01033189
60695
Bacteroidota
GCT
Ser
>WENV170329197
CESV01087556
127414
Bacteroidota
TGG
Pro
>WENV170328970
CESV01063532
127414
Bacteroidota
TGG
Pro
>WENV170330239
CESV01191631
238764
Bacteroidota
>WENV170329322
CESV01100477
238764
Bacteroidota
>WENV170328534
CESV01022703
238764
Bacteroidota
>WENV170328492
CESV01018807
190649
Bacteroidota
GTT
Asn
>WENV170330259
CESV01192176
44938
Bacteroidota
TGA
Ser
>WENV170329848
CESV01168668
44938
Bacteroidota
TGA
Ser
>WENV170328723
CESV01039942
44938
Bacteroidota
TGA
Ser
>WENV170330051
CESV01184203
320640
Bacteroidota
TTG
Gln
>WENV170329109
CESV01077955
320640
Bacteroidota
TTG
Gln
>WENV170328464
CESV01016577
320640
Bacteroidota
TTG
Gln
>WENV170329125
CESV01080001
17987
Bacteroidota
GGA
Ser
>WENV170329907
CESV01173216
259147
Bacteroidota
TTT
Lys
>WENV170328696
CESV01036663
197220
Bacteroidota
TGT
Thr
>WENV170329305
CESV01098788
193627
Bacteroidota
TCT
Arg
>WENV170328436
CESV01014147
193627
Bacteroidota
TCT
Arg
>WENV170330108
CESV01187488
145555
Bacteroidota
GTC
Asp
>WENV170328791
CESV01046534
240901
Bacteroidota
TTT
Lys
>WENV170328323
CESV01004850
185921
Bacteroidota
GTC
Asp
>WENV170329368
CESV01106723
145507
Bacteroidota
TCT
Arg
>WENV170328954
CESV01062591
360599
Bacteroidota
GGT
Thr
>WENV170329360
CESV01105201
16286
Bacteroidota
GGA
Ser
>WENV170330471
CESV01304254
127449
Bacteroidota
TAC
Val
>WENV170328919
CESV01059600
193473
Bacteroidota
GTC
Asp
>WENV170328494
CESV01019396
193473
Bacteroidota
GTC
Asp
>WENV170329756
CESV01158504
110457
Bacteroidota
TAG
Leu
>WENV170329518
CESV01127553
110457
Bacteroidota
TAG
Leu
>WENV170328929
CESV01060012
110457
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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