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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170329444
CESV01117143
448974
Gammaproteobacteria
GCA
Cys
>WENV170329656
CESV01145712
263230
Gammaproteobacteria
TTT
Lys
>WENV170329250
CESV01092073
262285
Gammaproteobacteria
TGC
Ala
>WENV170329111
CESV01078727
319314
Gammaproteobacteria
TGT
Thr
>WENV170329295
CESV01097776
312456
Gammaproteobacteria
TGC
Ala
>WENV170328382
CESV01009983
305458
Gammaproteobacteria
TAC
Val
>WENV170328620
CESV01029324
71882
Gammaproteobacteria
TAA
Leu
>WENV170329186
CESV01085696
71882
Gammaproteobacteria
TAA
Leu
>WENV170329167
CESV01083419
65736
Gammaproteobacteria
TAA
Leu
>WENV170330034
CESV01182763
65736
Gammaproteobacteria
TAA
Leu
>WENV170330173
CESV01190148
65736
Gammaproteobacteria
TAA
Leu
>WENV170330490
CESV01314772
260947
Gammaproteobacteria
TTG
Gln
>WENV170329760
CESV01159235
18561
Gammaproteobacteria
TGA
Ser
>WENV170329426
CESV01113974
65163
Gammaproteobacteria
CAA
Leu
>WENV170329096
CESV01075986
451853
Gammaproteobacteria
GCA
Cys
>WENV170329224
CESV01089672
451853
Gammaproteobacteria
GCA
Cys
>WENV170329539
CESV01130051
451853
Gammaproteobacteria
GCA
Cys
>WENV170328497
CESV01019668
172986
Gammaproteobacteria
CCA
Trp
>WENV170328673
CESV01034966
172986
Gammaproteobacteria
CCA
Trp
>WENV170328891
CESV01056878
172986
Gammaproteobacteria
CCA
Trp
>WENV170329004
CESV01067030
172986
Gammaproteobacteria
CCA
Trp
>WENV170330304
CESV01193196
172986
Gammaproteobacteria
CCA
Trp
>WENV170328830
CESV01050761
166420
Gammaproteobacteria
>WENV170328509
CESV01020139
325641
Gammaproteobacteria
CCA
Trp
>WENV170329188
CESV01086677
263086
Gammaproteobacteria
GTT
Asn
>WENV170329977
CESV01178164
316791
Gammaproteobacteria
GAA
Phe
>WENV170328443
CESV01014623
448815
Gammaproteobacteria
TCC
Gly
>WENV170330333
CESV01193706
107578
Gammaproteobacteria
GAG
Leu
>WENV170329428
CESV01113994
257590
Gammaproteobacteria
GGT
Thr
>WENV170330417
CESV01263655
189269
Gammaproteobacteria
CGG
Pro
>WENV170330750
CESV01372373
52309
Gammaproteobacteria
>WENV170330183
CESV01190359
215947
Gammaproteobacteria
ACG
Arg
>WENV170328619
CESV01029320
161319
Gammaproteobacteria
>WENV170329597
CESV01136566
65858
Gammaproteobacteria
CAA
Leu
>WENV170328798
CESV01046865
259519
Gammaproteobacteria
GGC
Ala
>WENV170329113
CESV01078964
265381
Gammaproteobacteria
GTT
Asn
>WENV170330339
CESV01196589
449736
Gammaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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