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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170329111
CESV01078727
312287
Gammaproteobacteria
TGT
Thr
>WENV170329656
CESV01145712
279385
Gammaproteobacteria
TTT
Lys
>WENV170328619
CESV01029320
147779
Gammaproteobacteria
CAT
Met
>WENV170328850
CESV01052625
149035
Gammaproteobacteria
CCG
Arg
>WENV170330385
CESV01232387
61925
Gammaproteobacteria
TAA
Leu
>WENV170330284
CESV01192804
160030
Gammaproteobacteria
GGG
Pro
>WENV170328406
CESV01011604
185163
Gammaproteobacteria
ACG
Arg
>WENV170330395
CESV01241690
240619
Gammaproteobacteria
TGT
Thr
>WENV170328502
CESV01019908
240642
Gammaproteobacteria
GTT
Asn
>WENV170330304
CESV01193196
149036
Gammaproteobacteria
CCA
Trp
>WENV170329004
CESV01067030
149036
Gammaproteobacteria
CCA
Trp
>WENV170328891
CESV01056878
149036
Gammaproteobacteria
CCA
Trp
>WENV170328673
CESV01034966
149036
Gammaproteobacteria
CCA
Trp
>WENV170328497
CESV01019668
149036
Gammaproteobacteria
CCA
Trp
>WENV170329428
CESV01113994
322642
Gammaproteobacteria
GGT
Thr
>WENV170328980
CESV01064774
322642
Gammaproteobacteria
GGT
Thr
>WENV170328817
CESV01049549
322642
Gammaproteobacteria
GGT
Thr
>WENV170328411
CESV01011964
322642
Gammaproteobacteria
GGT
Thr
>WENV170328445
CESV01014994
145261
Gammaproteobacteria
CAT
Met
>WENV170330145
CESV01189019
145369
Gammaproteobacteria
CGG
Pro
>WENV170329132
CESV01080754
69672
Gammaproteobacteria
TAA
Leu
>WENV170329484
CESV01121808
412799
Gammaproteobacteria
GCA
Cys
>WENV170328680
CESV01035366
340801
Gammaproteobacteria
CCT
Arg
>WENV170330339
CESV01196589
426403
Gammaproteobacteria
GCA
Cys
>WENV170329860
CESV01169567
202944
Gammaproteobacteria
TGG
Pro
>WENV170328717
CESV01039289
411766
Gammaproteobacteria
GCA
Cys
>WENV170328491
CESV01018785
59830
Gammaproteobacteria
CAA
Leu
>WENV170328382
CESV01009983
319098
Gammaproteobacteria
TAC
Val
>WENV170330490
CESV01314772
241136
Gammaproteobacteria
TTG
Gln
>WENV170329597
CESV01136566
59658
Gammaproteobacteria
CAA
Leu
>WENV170330332
CESV01193705
149037
Gammaproteobacteria
GAC
Val
>WENV170329444
CESV01117143
411735
Gammaproteobacteria
GCA
Cys
>WENV170329186
CESV01085696
73305
Gammaproteobacteria
TAA
Leu
>WENV170328620
CESV01029324
73305
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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