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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170338167
CETB01009247
387387
Cyanobacteriota
GAC
Val
>WENV170338244
CETB01017020
387387
Cyanobacteriota
GAC
Val
>WENV170338255
CETB01017827
387387
Cyanobacteriota
GAC
Val
>WENV170339402
CETB01123997
366531
Cyanobacteriota
TTG
Gln
>WENV170339139
CETB01096674
149623
Cyanobacteriota
GAT
Ile
>WENV170338126
CETB01005011
162341
Cyanobacteriota
TCT
Arg
>WENV170338158
CETB01008224
162341
Cyanobacteriota
TCT
Arg
>WENV170339193
CETB01101817
267489
Cyanobacteriota
GGC
Ala
>WENV170339209
CETB01103369
267489
Cyanobacteriota
GGC
Ala
>WENV170339323
CETB01115643
267489
Cyanobacteriota
GGC
Ala
>WENV170338189
CETB01011653
145761
Cyanobacteriota
GTC
Asp
>WENV170339631
CETB01145842
145761
Cyanobacteriota
GTC
Asp
>WENV170339742
CETB01156363
306125
Cyanobacteriota
GTG
His
>WENV170338912
CETB01071678
306125
Cyanobacteriota
GTG
His
>WENV170338412
CETB01029760
306125
Cyanobacteriota
GTG
His
>WENV170338375
CETB01027762
164907
Cyanobacteriota
GGG
Pro
>WENV170339088
CETB01090599
96363
Cyanobacteriota
TAG
Leu
>WENV170338802
CETB01062021
96363
Cyanobacteriota
TAG
Leu
>WENV170338687
CETB01052000
338782
Cyanobacteriota
GTT
Asn
>WENV170339653
CETB01148830
149253
Cyanobacteriota
ACG
Arg
>WENV170338311
CETB01021402
149253
Cyanobacteriota
ACG
Arg
>WENV170339311
CETB01113998
162346
Cyanobacteriota
GGG
Pro
>WENV170338207
CETB01013342
162346
Cyanobacteriota
GGG
Pro
>WENV170339484
CETB01132714
153480
Cyanobacteriota
CAT
Met
>WENV170338982
CETB01080324
153480
Cyanobacteriota
CAT
Met
>WENV170338820
CETB01063474
240100
Cyanobacteriota
CAT
Met
>WENV170339414
CETB01124926
95762
Cyanobacteriota
AAG
Leu
>WENV170339397
CETB01123070
95762
Cyanobacteriota
AAG
Leu
>WENV170338195
CETB01012252
95762
Cyanobacteriota
AAG
Leu
>WENV170338136
CETB01006150
95762
Cyanobacteriota
AAG
Leu
>WENV170339318
CETB01114470
341034
Cyanobacteriota
GGT
Thr
>WENV170338317
CETB01021619
145893
Cyanobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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