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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170357706
CETK01020163
139286
Bacteroidota
TGG
Pro
>WENV170357596
CETK01011988
306609
Bacteroidota
GAA
Phe
>WENV170358426
CETK01091303
306609
Bacteroidota
GAA
Phe
>WENV170357520
CETK01006356
308806
Bacteroidota
TCC
Gly
>WENV170358100
CETK01054129
308806
Bacteroidota
TCC
Gly
>WENV170358836
CETK01144721
294483
Bacteroidota
TTT
Lys
>WENV170357501
CETK01004096
430187
Bacteroidota
GCA
Cys
>WENV170358118
CETK01055855
99288
Bacteroidota
TAG
Leu
>WENV170358037
CETK01046327
238872
Bacteroidota
TTT
Lys
>WENV170358893
CETK01150651
236125
Bacteroidota
GAA
Phe
>WENV170358889
CETK01150177
127458
Bacteroidota
GAC
Val
>WENV170358141
CETK01058222
127458
Bacteroidota
GAC
Val
>WENV170357780
CETK01024159
127458
Bacteroidota
GAC
Val
>WENV170358779
CETK01139353
96678
Bacteroidota
TAG
Leu
>WENV170358193
CETK01063003
273242
Bacteroidota
CCA
Trp
>WENV170357788
CETK01024767
127414
Bacteroidota
TGG
Pro
>WENV170357517
CETK01005900
238764
Bacteroidota
>WENV170358632
CETK01119025
190649
Bacteroidota
GTT
Asn
>WENV170358756
CETK01136146
44938
Bacteroidota
TGA
Ser
>WENV170358554
CETK01108495
44938
Bacteroidota
TGA
Ser
>WENV170358099
CETK01054075
44938
Bacteroidota
TGA
Ser
>WENV170357975
CETK01039425
44938
Bacteroidota
TGA
Ser
>WENV170357831
CETK01028745
259147
Bacteroidota
TTT
Lys
>WENV170359038
CETK01158041
235802
Bacteroidota
CAT
Met
>WENV170357990
CETK01041218
193627
Bacteroidota
TCT
Arg
>WENV170357686
CETK01018438
150454
Bacteroidota
TGT
Thr
>WENV170359056
CETK01158646
185921
Bacteroidota
GTC
Asp
>WENV170358820
CETK01143030
185921
Bacteroidota
GTC
Asp
>WENV170359003
CETK01156859
145507
Bacteroidota
TCT
Arg
>WENV170358769
CETK01138335
127449
Bacteroidota
TAC
Val
>WENV170358109
CETK01055082
48914
Bacteroidota
TGA
Ser
>WENV170358835
CETK01144630
193473
Bacteroidota
GTC
Asp
>WENV170358633
CETK01119025
193473
Bacteroidota
GTC
Asp
>WENV170359288
CETK01321365
127216
Bacteroidota
GGG
Pro
>WENV170358449
CETK01094149
127216
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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