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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170361576
CETM01014898
194726
Bacteroidota
TGC
Ala
>WENV170361760
CETM01026548
139484
Bacteroidota
TAC
Val
>WENV170362109
CETM01046481
301008
Bacteroidota
TTG
Gln
>WENV170362192
CETM01054693
454104
Bacteroidota
GCA
Cys
>WENV170362517
CETM01077630
50353
Bacteroidota
TGA
Ser
>WENV170362599
CETM01084058
18750
Bacteroidota
GGA
Ser
>WENV170362632
CETM01086990
284652
Bacteroidota
TCC
Gly
>WENV170362976
CETM01116192
158985
Bacteroidota
GTC
Asp
>WENV170362980
CETM01116690
170034
Bacteroidota
>WENV170363103
CETM01126389
300647
Bacteroidota
TTT
Lys
>WENV170363139
CETM01130248
301008
Bacteroidota
TTG
Gln
>WENV170363154
CETM01132071
144149
Bacteroidota
TGG
Pro
>WENV170363523
CETM01166448
138908
Bacteroidota
TGG
Pro
>WENV170363682
CETM01180955
449969
Bacteroidota
GCA
Cys
>WENV170363834
CETM01190972
158556
Bacteroidota
GTT
Asn
>WENV170364323
CETM01213400
258133
Bacteroidota
>WENV170364379
CETM01252675
69028
Bacteroidota
GAG
Leu
>WENV170364501
CETM01311869
158981
Bacteroidota
GGC
Ala
>WENV170364698
CETM01394572
449969
Bacteroidota
GCA
Cys
>WENV170364877
CETM01452208
50545
Bacteroidota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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