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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170436571
CEUT01066047
147373
Gammaproteobacteria
CAT
Met
>WENV170436201
CEUT01029106
95633
Gammaproteobacteria
GTA
Tyr
>WENV170435895
CEUT01004212
58767
Gammaproteobacteria
CAG
Leu
>WENV170436190
CEUT01027876
235516
Gammaproteobacteria
GTG
His
>WENV170436402
CEUT01049109
145364
Gammaproteobacteria
GGG
Pro
>WENV170436564
CEUT01065524
47425
Gammaproteobacteria
GGA
Ser
>WENV170436499
CEUT01060257
144979
Gammaproteobacteria
CGG
Pro
>WENV170436289
CEUT01038612
149036
Gammaproteobacteria
CCA
Trp
>WENV170435997
CEUT01012774
44886
Gammaproteobacteria
TGA
Ser
>WENV170436789
CEUT01126374
24366
Gammaproteobacteria
GGA
Ser
>WENV170436193
CEUT01027899
144982
Gammaproteobacteria
TGG
Pro
>WENV170435868
CEUT01001323
412799
Gammaproteobacteria
GCA
Cys
>WENV170436654
CEUT01084113
260238
Gammaproteobacteria
>WENV170436841
CEUT01141586
95635
Gammaproteobacteria
CAA
Leu
>WENV170436135
CEUT01024390
62501
Gammaproteobacteria
CAG
Leu
>WENV170436134
CEUT01024390
62501
Gammaproteobacteria
CAG
Leu
>WENV170436095
CEUT01022253
243902
Gammaproteobacteria
GTT
Asn
>WENV170436094
CEUT01022253
243902
Gammaproteobacteria
GTT
Asn
>WENV170436358
CEUT01044467
240084
Gammaproteobacteria
GGT
Thr
>WENV170436759
CEUT01121210
238510
Gammaproteobacteria
GCC
Gly
>WENV170436394
CEUT01048396
412476
Gammaproteobacteria
TCC
Gly
>WENV170436393
CEUT01048396
113870
Gammaproteobacteria
GTA
Tyr
>WENV170435898
CEUT01004413
10767
Gammaproteobacteria
GCT
Ser
>WENV170436196
CEUT01028074
338337
Gammaproteobacteria
CCT
Arg
>WENV170436261
CEUT01035015
144995
Gammaproteobacteria
GAT
Ile
>WENV170436315
CEUT01040704
237438
Gammaproteobacteria
GAA
Phe
>WENV170436640
CEUT01078529
149037
Gammaproteobacteria
GAC
Val
>WENV170436184
CEUT01027568
147050
Gammaproteobacteria
GAT
Ile
>WENV170436270
CEUT01036562
23396
Gammaproteobacteria
GGA
Ser
>WENV170436123
CEUT01023674
238761
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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