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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170461962
CEVD01032702
146435
Gammaproteobacteria
TGG
Pro
>WENV170463101
CEVD01113331
279385
Gammaproteobacteria
TTT
Lys
>WENV170463102
CEVD01113331
279385
Gammaproteobacteria
TTT
Lys
>WENV170465296
CEVD01476523
147779
Gammaproteobacteria
CAT
Met
>WENV170464022
CEVD01188983
443007
Gammaproteobacteria
CCC
Gly
>WENV170462757
CEVD01084778
149035
Gammaproteobacteria
CCG
Arg
>WENV170464150
CEVD01197918
283668
Gammaproteobacteria
TTT
Lys
>WENV170461633
CEVD01013020
185163
Gammaproteobacteria
ACG
Arg
>WENV170461632
CEVD01013020
185163
Gammaproteobacteria
ACG
Arg
>WENV170464800
CEVD01230095
181949
Gammaproteobacteria
CAT
Met
>WENV170463824
CEVD01176021
149036
Gammaproteobacteria
CCA
Trp
>WENV170463802
CEVD01174484
322642
Gammaproteobacteria
GGT
Thr
>WENV170462594
CEVD01073189
322642
Gammaproteobacteria
GGT
Thr
>WENV170462411
CEVD01062005
322642
Gammaproteobacteria
GGT
Thr
>WENV170461854
CEVD01025310
412799
Gammaproteobacteria
GCA
Cys
>WENV170462413
CEVD01062022
340801
Gammaproteobacteria
CCT
Arg
>WENV170463722
CEVD01169536
175987
Gammaproteobacteria
CGG
Pro
>WENV170461980
CEVD01033446
152301
Gammaproteobacteria
GAT
Ile
>WENV170463054
CEVD01108008
421020
Gammaproteobacteria
GCA
Cys
>WENV170461631
CEVD01013020
10767
Gammaproteobacteria
GCT
Ser
>WENV170465102
CEVD01396239
341782
Gammaproteobacteria
TTG
Gln
>WENV170461855
CEVD01025310
77137
Gammaproteobacteria
TAA
Leu
>WENV170462872
CEVD01092646
412373
Gammaproteobacteria
GCA
Cys
>WENV170461961
CEVD01032697
151889
Gammaproteobacteria
CAT
Met
>WENV170462192
CEVD01044970
195303
Gammaproteobacteria
GAT
Ile
>WENV170463407
CEVD01140760
59658
Gammaproteobacteria
CAA
Leu
>WENV170464770
CEVD01221482
149037
Gammaproteobacteria
GAC
Val
>WENV170464248
CEVD01203791
45411
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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