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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170467872
CEVE01290822
396582
Alphaproteobacteria
GAC
Val
>WENV170467107
CEVE01116921
259585
Alphaproteobacteria
CCA
Trp
>WENV170467660
CEVE01224994
159552
Alphaproteobacteria
TGG
Pro
>WENV170466753
CEVE01080962
166599
Alphaproteobacteria
CAT
Met
>WENV170466976
CEVE01104009
166599
Alphaproteobacteria
CAT
Met
>WENV170467027
CEVE01108474
166599
Alphaproteobacteria
CAT
Met
>WENV170466200
CEVE01028184
207103
Alphaproteobacteria
GTG
His
>WENV170466419
CEVE01049507
26906
Alphaproteobacteria
GCT
Ser
>WENV170466694
CEVE01075209
205335
Alphaproteobacteria
GGG
Pro
>WENV170467824
CEVE01283222
318054
Alphaproteobacteria
TAC
Val
>WENV170467062
CEVE01112705
449739
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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