This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170520801
CEWF01013498
146662
Gammaproteobacteria
GAC
Val
>WENV170520795
CEWF01013168
235837
Gammaproteobacteria
GTT
Asn
>WENV170520772
CEWF01009854
147373
Gammaproteobacteria
CAT
Met
>WENV170521025
CEWF01053083
147373
Gammaproteobacteria
CAT
Met
>WENV170520777
CEWF01010366
95633
Gammaproteobacteria
GTA
Tyr
>WENV170521314
CEWF01150232
147779
Gammaproteobacteria
CAT
Met
>WENV170520819
CEWF01016969
149035
Gammaproteobacteria
CCG
Arg
>WENV170521147
CEWF01097381
17426
Gammaproteobacteria
GCT
Ser
>WENV170520991
CEWF01048183
147053
Gammaproteobacteria
GTT
Asn
>WENV170521196
CEWF01122974
235452
Gammaproteobacteria
GAA
Phe
>WENV170520816
CEWF01016463
144979
Gammaproteobacteria
CGG
Pro
>WENV170521148
CEWF01099534
152455
Gammaproteobacteria
CAT
Met
>WENV170520835
CEWF01019617
240642
Gammaproteobacteria
GTT
Asn
>WENV170521052
CEWF01055466
149036
Gammaproteobacteria
CCA
Trp
>WENV170521023
CEWF01052805
149036
Gammaproteobacteria
CCA
Trp
>WENV170520831
CEWF01018788
149036
Gammaproteobacteria
CCA
Trp
>WENV170521289
CEWF01148404
44886
Gammaproteobacteria
TGA
Ser
>WENV170521007
CEWF01050482
24366
Gammaproteobacteria
GGA
Ser
>WENV170520744
CEWF01005310
237425
Gammaproteobacteria
TTC
Glu
>WENV170520734
CEWF01004480
237425
Gammaproteobacteria
TTC
Glu
>WENV170520932
CEWF01038275
412799
Gammaproteobacteria
GCA
Cys
>WENV170520731
CEWF01003986
412799
Gammaproteobacteria
GCA
Cys
>WENV170520880
CEWF01026182
340801
Gammaproteobacteria
CCT
Arg
>WENV170520754
CEWF01006521
6976
Gammaproteobacteria
GCT
Ser
>WENV170521043
CEWF01055005
95635
Gammaproteobacteria
CAA
Leu
>WENV170520817
CEWF01016467
62501
Gammaproteobacteria
CAG
Leu
>WENV170520822
CEWF01017191
147111
Gammaproteobacteria
CCG
Arg
>WENV170520726
CEWF01003344
23429
Gammaproteobacteria
GGA
Ser
>WENV170520926
CEWF01034970
113688
Gammaproteobacteria
GTA
Tyr
>WENV170521037
CEWF01054650
338337
Gammaproteobacteria
CCT
Arg
>WENV170521264
CEWF01144154
16396
Gammaproteobacteria
TGA
Ser
>WENV170520883
CEWF01026779
253713
Gammaproteobacteria
TTC
Glu
>WENV170521266
CEWF01144804
147123
Gammaproteobacteria
CAT
Met
>WENV170520903
CEWF01029572
151889
Gammaproteobacteria
CAT
Met
>WENV170520936
CEWF01038821
243485
Gammaproteobacteria
TGT
Thr
>WENV170520747
CEWF01005536
237421
Gammaproteobacteria
TGT
Thr
>WENV170520931
CEWF01036837
149037
Gammaproteobacteria
GAC
Val
>WENV170520729
CEWF01003676
147117
Gammaproteobacteria
GTC
Asp
>WENV170521167
CEWF01109051
163580
Gammaproteobacteria
GAC
Val
>WENV170521060
CEWF01055743
23396
Gammaproteobacteria
GGA
Ser
>WENV170520723
CEWF01003238
157977
Gammaproteobacteria
TGG
Pro
>WENV170520727
CEWF01003414
147127
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK