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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170541036
CXPI01000005
235347
Actinomycetota
GGC
Ala
>WENV170541037
CXPI01000005
235347
Actinomycetota
GGC
Ala
>WENV170541054
CXPI01000046
201717
Actinomycetota
CTT
Lys
>WENV170541075
CXPI01000121
144600
Actinomycetota
TGG
Pro
>WENV170541049
CXPI01000033
235194
Actinomycetota
GTG
His
>WENV170541071
CXPI01000078
273786
Actinomycetota
CGT
Thr
>WENV170541038
CXPI01000005
158720
Actinomycetota
ACG
Arg
>WENV170541087
CXPI01000295
158720
Actinomycetota
ACG
Arg
>WENV170541088
CXPI01000295
158720
Actinomycetota
ACG
Arg
>WENV170541068
CXPI01000067
144826
Actinomycetota
GGG
Pro
>WENV170541058
CXPI01000049
23370
Actinomycetota
GCT
Ser
>WENV170541083
CXPI01000159
174149
Actinomycetota
GAT
Ile
>WENV170541074
CXPI01000093
338239
Actinomycetota
TTC
Glu
>WENV170541084
CXPI01000159
235174
Actinomycetota
TGC
Ala
>WENV170541082
CXPI01000155
235101
Actinomycetota
TTT
Lys
>WENV170541065
CXPI01000067
356045
Actinomycetota
GAC
Val
>WENV170541060
CXPI01000055
356045
Actinomycetota
GAC
Val
>WENV170541050
CXPI01000035
145345
Actinomycetota
TAC
Val
>WENV170541066
CXPI01000067
235199
Actinomycetota
CAC
Val
>WENV170541061
CXPI01000055
235199
Actinomycetota
CAC
Val
>WENV170541086
CXPI01000172
338235
Actinomycetota
CCC
Gly
>WENV170541041
CXPI01000018
367535
Actinomycetota
CTG
Gln
>WENV170541035
CXPI01000005
413665
Actinomycetota
TTG
Gln
>WENV170541033
CXPI01000001
45154
Actinomycetota
TGA
Ser
>WENV170541045
CXPI01000022
254857
Actinomycetota
CCG
Arg
>WENV170541057
CXPI01000049
144700
Actinomycetota
CAT
Met
>WENV170541040
CXPI01000018
295695
Actinomycetota
CTC
Glu
>WENV170541047
CXPI01000025
235148
Actinomycetota
GTT
Asn
>WENV170541042
CXPI01000018
53078
Actinomycetota
GGA
Ser
>WENV170541043
CXPI01000019
144825
Actinomycetota
CAT
Met
>WENV170541081
CXPI01000127
119508
Actinomycetota
TAA
Leu
>WENV170541044
CXPI01000019
235348
Actinomycetota
CCT
Arg
>WENV170541072
CXPI01000078
113601
Actinomycetota
TAG
Leu
>WENV170541076
CXPI01000121
144595
Actinomycetota
CAA
Leu
>WENV170541070
CXPI01000077
431657
Actinomycetota
CCC
Gly
>WENV170541062
CXPI01000059
45852
Actinomycetota
CGA
Ser
>WENV170541069
CXPI01000071
80622
Actinomycetota
CAG
Leu
>WENV170541039
CXPI01000015
16222
Actinomycetota
GAG
Leu
>WENV170541048
CXPI01000025
243162
Actinomycetota
GTT
Asn
>WENV170541056
CXPI01000049
95593
Actinomycetota
>WENV170541055
CXPI01000048
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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