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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170541057
CXPI01000049
190892
Actinomycetota
CAT
Met
>WENV170541054
CXPI01000046
176876
Actinomycetota
CTT
Lys
>WENV170541035
CXPI01000005
448096
Actinomycetota
TTG
Gln
>WENV170541036
CXPI01000005
293317
Actinomycetota
GGC
Ala
>WENV170541037
CXPI01000005
293317
Actinomycetota
GGC
Ala
>WENV170541044
CXPI01000019
257345
Actinomycetota
CCT
Arg
>WENV170541076
CXPI01000121
167861
Actinomycetota
CAA
Leu
>WENV170541075
CXPI01000121
159159
Actinomycetota
TGG
Pro
>WENV170541062
CXPI01000059
49789
Actinomycetota
CGA
Ser
>WENV170541072
CXPI01000078
125238
Actinomycetota
TAG
Leu
>WENV170541068
CXPI01000067
169995
Actinomycetota
GGG
Pro
>WENV170541033
CXPI01000001
49723
Actinomycetota
TGA
Ser
>WENV170541081
CXPI01000127
131003
Actinomycetota
TAA
Leu
>WENV170541086
CXPI01000172
372017
Actinomycetota
CCC
Gly
>WENV170541070
CXPI01000077
448231
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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