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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170541970
CXPV01000014
190892
Actinomycetota
CAT
Met
>WENV170541995
CXPV01000066
293317
Actinomycetota
GGC
Ala
>WENV170541996
CXPV01000066
293317
Actinomycetota
GGC
Ala
>WENV170541976
CXPV01000031
322268
Actinomycetota
CGT
Thr
>WENV170541983
CXPV01000037
211952
Actinomycetota
ACG
Arg
>WENV170541984
CXPV01000037
211952
Actinomycetota
ACG
Arg
>WENV170541973
CXPV01000018
257345
Actinomycetota
CCT
Arg
>WENV170541980
CXPV01000032
238709
Actinomycetota
CAA
Leu
>WENV170541979
CXPV01000032
159159
Actinomycetota
TGG
Pro
>WENV170541990
CXPV01000056
49789
Actinomycetota
CGA
Ser
>WENV170541981
CXPV01000036
328213
Actinomycetota
GTT
Asn
>WENV170541982
CXPV01000036
328213
Actinomycetota
GTT
Asn
>WENV170541986
CXPV01000049
218329
Actinomycetota
CTT
Lys
>WENV170541974
CXPV01000021
169995
Actinomycetota
GGG
Pro
>WENV170542002
CXPV01000081
49723
Actinomycetota
TGA
Ser
>WENV170541989
CXPV01000053
470684
Actinomycetota
CCC
Gly
>WENV170541975
CXPV01000022
131003
Actinomycetota
TAA
Leu
>WENV170542016
CXPV01000273
372017
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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