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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170543357
CXQS01000021
235347
Actinomycetota
GGC
Ala
>WENV170543394
CXQS01000341
235347
Actinomycetota
GGC
Ala
>WENV170543395
CXQS01000341
235347
Actinomycetota
GGC
Ala
>WENV170543360
CXQS01000024
201717
Actinomycetota
CTT
Lys
>WENV170543356
CXQS01000019
144600
Actinomycetota
TGG
Pro
>WENV170543404
CXQS01000871
144600
Actinomycetota
TGG
Pro
>WENV170543393
CXQS01000228
235194
Actinomycetota
GTG
His
>WENV170543366
CXQS01000035
273786
Actinomycetota
CGT
Thr
>WENV170543358
CXQS01000021
158720
Actinomycetota
ACG
Arg
>WENV170543359
CXQS01000021
158720
Actinomycetota
ACG
Arg
>WENV170543396
CXQS01000358
158720
Actinomycetota
ACG
Arg
>WENV170543415
CXQS01002561
158720
Actinomycetota
ACG
Arg
>WENV170543416
CXQS01002561
158720
Actinomycetota
ACG
Arg
>WENV170543403
CXQS01000835
144826
Actinomycetota
GGG
Pro
>WENV170543345
CXQS01000001
144826
Actinomycetota
GGG
Pro
>WENV170543350
CXQS01000006
23370
Actinomycetota
GCT
Ser
>WENV170543398
CXQS01000571
174149
Actinomycetota
GAT
Ile
>WENV170543370
CXQS01000066
174149
Actinomycetota
GAT
Ile
>WENV170543364
CXQS01000029
338239
Actinomycetota
TTC
Glu
>WENV170543399
CXQS01000571
235174
Actinomycetota
TGC
Ala
>WENV170543371
CXQS01000066
235174
Actinomycetota
TGC
Ala
>WENV170543409
CXQS01001565
235101
Actinomycetota
TTT
Lys
>WENV170543380
CXQS01000107
235101
Actinomycetota
TTT
Lys
>WENV170543375
CXQS01000094
356045
Actinomycetota
GAC
Val
>WENV170543342
CXQS01000001
356045
Actinomycetota
GAC
Val
>WENV170543412
CXQS01001776
145345
Actinomycetota
TAC
Val
>WENV170543369
CXQS01000055
145345
Actinomycetota
TAC
Val
>WENV170543406
CXQS01000914
235199
Actinomycetota
CAC
Val
>WENV170543376
CXQS01000094
235199
Actinomycetota
CAC
Val
>WENV170543343
CXQS01000001
235199
Actinomycetota
CAC
Val
>WENV170543392
CXQS01000211
338235
Actinomycetota
CCC
Gly
>WENV170543386
CXQS01000125
367535
Actinomycetota
CTG
Gln
>WENV170543414
CXQS01002042
413665
Actinomycetota
TTG
Gln
>WENV170543351
CXQS01000007
413665
Actinomycetota
TTG
Gln
>WENV170543354
CXQS01000015
45154
Actinomycetota
TGA
Ser
>WENV170543418
CXQS01003287
254857
Actinomycetota
CCG
Arg
>WENV170543377
CXQS01000096
254857
Actinomycetota
CCG
Arg
>WENV170543349
CXQS01000006
144700
Actinomycetota
CAT
Met
>WENV170543413
CXQS01001860
295695
Actinomycetota
CTC
Glu
>WENV170543385
CXQS01000125
295695
Actinomycetota
CTC
Glu
>WENV170543417
CXQS01002965
235148
Actinomycetota
GTT
Asn
>WENV170543400
CXQS01000577
235148
Actinomycetota
GTT
Asn
>WENV170543346
CXQS01000004
235148
Actinomycetota
GTT
Asn
>WENV170543401
CXQS01000667
53078
Actinomycetota
GGA
Ser
>WENV170543387
CXQS01000125
53078
Actinomycetota
GGA
Ser
>WENV170543410
CXQS01001573
144825
Actinomycetota
CAT
Met
>WENV170543379
CXQS01000097
144825
Actinomycetota
CAT
Met
>WENV170543411
CXQS01001761
412399
Actinomycetota
CCC
Gly
>WENV170543388
CXQS01000126
412399
Actinomycetota
CCC
Gly
>WENV170543361
CXQS01000026
119508
Actinomycetota
TAA
Leu
>WENV170543368
CXQS01000046
235348
Actinomycetota
CCT
Arg
>WENV170543367
CXQS01000035
113601
Actinomycetota
TAG
Leu
>WENV170543355
CXQS01000019
144595
Actinomycetota
CAA
Leu
>WENV170543352
CXQS01000013
45852
Actinomycetota
CGA
Ser
>WENV170543389
CXQS01000126
80622
Actinomycetota
CAG
Leu
>WENV170543372
CXQS01000067
16222
Actinomycetota
GAG
Leu
>WENV170543365
CXQS01000030
243162
Actinomycetota
GTT
Asn
>WENV170543348
CXQS01000006
95593
Actinomycetota
>WENV170543373
CXQS01000072
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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