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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170543573
CXQV01000076
235347
Actinomycetota
GGC
Ala
>WENV170543574
CXQV01000076
235347
Actinomycetota
GGC
Ala
>WENV170543598
CXQV01001283
235347
Actinomycetota
GGC
Ala
>WENV170543599
CXQV01001415
235347
Actinomycetota
GGC
Ala
>WENV170543532
CXQV01000009
201717
Actinomycetota
CTT
Lys
>WENV170543524
CXQV01000004
144600
Actinomycetota
TGG
Pro
>WENV170543548
CXQV01000025
235194
Actinomycetota
GTG
His
>WENV170543571
CXQV01000075
158720
Actinomycetota
ACG
Arg
>WENV170543572
CXQV01000075
158720
Actinomycetota
ACG
Arg
>WENV170543575
CXQV01000076
158720
Actinomycetota
ACG
Arg
>WENV170543576
CXQV01000076
158720
Actinomycetota
ACG
Arg
>WENV170543588
CXQV01001024
158720
Actinomycetota
ACG
Arg
>WENV170543589
CXQV01001024
158720
Actinomycetota
ACG
Arg
>WENV170543570
CXQV01000067
144826
Actinomycetota
GGG
Pro
>WENV170543538
CXQV01000014
23370
Actinomycetota
GCT
Ser
>WENV170543557
CXQV01000048
174149
Actinomycetota
GAT
Ile
>WENV170543552
CXQV01000034
338239
Actinomycetota
TTC
Glu
>WENV170543558
CXQV01000048
235174
Actinomycetota
TGC
Ala
>WENV170543531
CXQV01000009
235101
Actinomycetota
TTT
Lys
>WENV170543591
CXQV01001123
356045
Actinomycetota
GAC
Val
>WENV170543586
CXQV01000994
356045
Actinomycetota
GAC
Val
>WENV170543582
CXQV01000143
356045
Actinomycetota
GAC
Val
>WENV170543577
CXQV01000090
356045
Actinomycetota
GAC
Val
>WENV170543567
CXQV01000066
356045
Actinomycetota
GAC
Val
>WENV170543530
CXQV01000008
145345
Actinomycetota
TAC
Val
>WENV170543592
CXQV01001123
235199
Actinomycetota
CAC
Val
>WENV170543587
CXQV01000994
235199
Actinomycetota
CAC
Val
>WENV170543578
CXQV01000090
235199
Actinomycetota
CAC
Val
>WENV170543568
CXQV01000066
235199
Actinomycetota
CAC
Val
>WENV170543540
CXQV01000018
338235
Actinomycetota
CCC
Gly
>WENV170543525
CXQV01000005
313386
Actinomycetota
CGT
Thr
>WENV170543564
CXQV01000062
367535
Actinomycetota
CTG
Gln
>WENV170543559
CXQV01000049
413665
Actinomycetota
TTG
Gln
>WENV170543583
CXQV01000190
45154
Actinomycetota
TGA
Ser
>WENV170543561
CXQV01000059
45154
Actinomycetota
TGA
Ser
>WENV170543519
CXQV01000002
254857
Actinomycetota
CCG
Arg
>WENV170543537
CXQV01000014
144700
Actinomycetota
CAT
Met
>WENV170543563
CXQV01000062
295695
Actinomycetota
CTC
Glu
>WENV170543556
CXQV01000046
235148
Actinomycetota
GTT
Asn
>WENV170543550
CXQV01000027
235148
Actinomycetota
GTT
Asn
>WENV170543549
CXQV01000027
235148
Actinomycetota
GTT
Asn
>WENV170543600
CXQV01001459
235148
Actinomycetota
GTT
Asn
>WENV170543595
CXQV01001238
235148
Actinomycetota
GTT
Asn
>WENV170543533
CXQV01000009
53078
Actinomycetota
GGA
Ser
>WENV170543529
CXQV01000007
144825
Actinomycetota
CAT
Met
>WENV170543522
CXQV01000004
119508
Actinomycetota
TAA
Leu
>WENV170543554
CXQV01000035
235348
Actinomycetota
CCT
Arg
>WENV170543526
CXQV01000005
113601
Actinomycetota
TAG
Leu
>WENV170543523
CXQV01000004
144595
Actinomycetota
CAA
Leu
>WENV170543565
CXQV01000064
431657
Actinomycetota
CCC
Gly
>WENV170543555
CXQV01000044
45852
Actinomycetota
CGA
Ser
>WENV170543566
CXQV01000064
80622
Actinomycetota
CAG
Leu
>WENV170543527
CXQV01000006
16222
Actinomycetota
GAG
Leu
>WENV170543536
CXQV01000014
95593
Actinomycetota
>WENV170543521
CXQV01000003
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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