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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170544225
CXRH01000003
235347
Actinomycetota
GGC
Ala
>WENV170544274
CXRH01000092
235347
Actinomycetota
GGC
Ala
>WENV170544275
CXRH01000092
235347
Actinomycetota
GGC
Ala
>WENV170544234
CXRH01000006
201717
Actinomycetota
CTT
Lys
>WENV170544223
CXRH01000003
144600
Actinomycetota
TGG
Pro
>WENV170544243
CXRH01000015
235194
Actinomycetota
GTG
His
>WENV170544226
CXRH01000003
158720
Actinomycetota
ACG
Arg
>WENV170544227
CXRH01000003
158720
Actinomycetota
ACG
Arg
>WENV170544253
CXRH01000027
144826
Actinomycetota
GGG
Pro
>WENV170544221
CXRH01000001
23370
Actinomycetota
GCT
Ser
>WENV170544254
CXRH01000035
174149
Actinomycetota
GAT
Ile
>WENV170544271
CXRH01000071
338239
Actinomycetota
TTC
Glu
>WENV170544255
CXRH01000035
235174
Actinomycetota
TGC
Ala
>WENV170544233
CXRH01000006
235101
Actinomycetota
TTT
Lys
>WENV170544266
CXRH01000051
356045
Actinomycetota
GAC
Val
>WENV170544250
CXRH01000027
356045
Actinomycetota
GAC
Val
>WENV170544238
CXRH01000009
145345
Actinomycetota
TAC
Val
>WENV170544267
CXRH01000051
235199
Actinomycetota
CAC
Val
>WENV170544251
CXRH01000027
235199
Actinomycetota
CAC
Val
>WENV170544273
CXRH01000084
338235
Actinomycetota
CCC
Gly
>WENV170544228
CXRH01000005
313386
Actinomycetota
CGT
Thr
>WENV170544258
CXRH01000036
367535
Actinomycetota
CTG
Gln
>WENV170544222
CXRH01000003
413665
Actinomycetota
TTG
Gln
>WENV170544237
CXRH01000008
45154
Actinomycetota
TGA
Ser
>WENV170544231
CXRH01000005
254857
Actinomycetota
CCG
Arg
>WENV170544220
CXRH01000001
144700
Actinomycetota
CAT
Met
>WENV170544257
CXRH01000036
295695
Actinomycetota
CTC
Glu
>WENV170544239
CXRH01000010
235148
Actinomycetota
GTT
Asn
>WENV170544256
CXRH01000036
53078
Actinomycetota
GGA
Ser
>WENV170544246
CXRH01000024
144825
Actinomycetota
CAT
Met
>WENV170544245
CXRH01000023
119508
Actinomycetota
TAA
Leu
>WENV170544247
CXRH01000024
235348
Actinomycetota
CCT
Arg
>WENV170544229
CXRH01000005
113601
Actinomycetota
TAG
Leu
>WENV170544224
CXRH01000003
144595
Actinomycetota
CAA
Leu
>WENV170544269
CXRH01000056
431657
Actinomycetota
CCC
Gly
>WENV170544236
CXRH01000008
45852
Actinomycetota
CGA
Ser
>WENV170544268
CXRH01000056
80622
Actinomycetota
CAG
Leu
>WENV170544244
CXRH01000016
16222
Actinomycetota
GAG
Leu
>WENV170544240
CXRH01000010
243162
Actinomycetota
GTT
Asn
>WENV170544219
CXRH01000001
95593
Actinomycetota
>WENV170544263
CXRH01000039
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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