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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170545225
CXRX01000717
397477
Bacillota
TTC
Glu
>WENV170545233
CXRX01001127
397477
Bacillota
TTC
Glu
>WENV170545241
CXRX01001225
397477
Bacillota
TTC
Glu
>WENV170545264
CXRX01001641
397477
Bacillota
TTC
Glu
>WENV170545276
CXRX01002273
397477
Bacillota
TTC
Glu
>WENV170545282
CXRX01002349
397477
Bacillota
TTC
Glu
>WENV170545228
CXRX01000825
242961
Bacillota
GGT
Thr
>WENV170545232
CXRX01001127
10912
Bacillota
GGA
Ser
>WENV170545263
CXRX01001641
10912
Bacillota
GGA
Ser
>WENV170545256
CXRX01001438
106079
Bacillota
TAG
Leu
>WENV170545254
CXRX01001438
314571
Bacillota
TAC
Val
>WENV170545226
CXRX01000725
16778
Bacillota
CGA
Ser
>WENV170545289
CXRX01002426
162028
Bacillota
ACG
Arg
>WENV170545277
CXRX01002304
162028
Bacillota
ACG
Arg
>WENV170545260
CXRX01001438
162028
Bacillota
ACG
Arg
>WENV170545247
CXRX01001246
162028
Bacillota
ACG
Arg
>WENV170545221
CXRX01000319
162028
Bacillota
ACG
Arg
>WENV170545285
CXRX01002354
314670
Bacillota
GAA
Phe
>WENV170545267
CXRX01001641
314670
Bacillota
GAA
Phe
>WENV170545245
CXRX01001225
314670
Bacillota
GAA
Phe
>WENV170545210
CXRX01000095
314670
Bacillota
GAA
Phe
>WENV170545207
CXRX01000093
342664
Bacillota
>WENV170545219
CXRX01000230
96872
Bacillota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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