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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170546779
CXTA01000003
190892
Actinomycetota
CAT
Met
>WENV170546796
CXTA01000017
176876
Actinomycetota
CTT
Lys
>WENV170546814
CXTA01000038
448096
Actinomycetota
TTG
Gln
>WENV170546813
CXTA01000038
293317
Actinomycetota
GGC
Ala
>WENV170546824
CXTA01000103
293317
Actinomycetota
GGC
Ala
>WENV170546825
CXTA01000103
293317
Actinomycetota
GGC
Ala
>WENV170546802
CXTA01000021
257345
Actinomycetota
CCT
Arg
>WENV170546820
CXTA01000068
167861
Actinomycetota
CAA
Leu
>WENV170546815
CXTA01000038
159159
Actinomycetota
TGG
Pro
>WENV170546783
CXTA01000010
49789
Actinomycetota
CGA
Ser
>WENV170546808
CXTA01000026
125238
Actinomycetota
TAG
Leu
>WENV170546790
CXTA01000012
169995
Actinomycetota
GGG
Pro
>WENV170546784
CXTA01000010
49723
Actinomycetota
TGA
Ser
>WENV170546818
CXTA01000049
131003
Actinomycetota
TAA
Leu
>WENV170546794
CXTA01000014
448231
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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