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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170547682
CXTQ01000320
235347
Actinomycetota
GGC
Ala
>WENV170547683
CXTQ01000320
235347
Actinomycetota
GGC
Ala
>WENV170547640
CXTQ01000027
201717
Actinomycetota
CTT
Lys
>WENV170547648
CXTQ01000052
144600
Actinomycetota
TGG
Pro
>WENV170547666
CXTQ01000139
235194
Actinomycetota
GTG
His
>WENV170547668
CXTQ01000186
158720
Actinomycetota
ACG
Arg
>WENV170547669
CXTQ01000186
158720
Actinomycetota
ACG
Arg
>WENV170547678
CXTQ01000248
144826
Actinomycetota
GGG
Pro
>WENV170547646
CXTQ01000047
23370
Actinomycetota
GCT
Ser
>WENV170547674
CXTQ01000209
338239
Actinomycetota
TTC
Glu
>WENV170547638
CXTQ01000020
235174
Actinomycetota
TGC
Ala
>WENV170547675
CXTQ01000216
235101
Actinomycetota
TTT
Lys
>WENV170547663
CXTQ01000132
356045
Actinomycetota
GAC
Val
>WENV170547656
CXTQ01000079
356045
Actinomycetota
GAC
Val
>WENV170547661
CXTQ01000101
145345
Actinomycetota
TAC
Val
>WENV170547664
CXTQ01000132
235199
Actinomycetota
CAC
Val
>WENV170547657
CXTQ01000079
235199
Actinomycetota
CAC
Val
>WENV170547659
CXTQ01000082
313386
Actinomycetota
CGT
Thr
>WENV170547685
CXTQ01000391
367535
Actinomycetota
CTG
Gln
>WENV170547667
CXTQ01000161
413665
Actinomycetota
TTG
Gln
>WENV170547641
CXTQ01000033
45154
Actinomycetota
TGA
Ser
>WENV170547665
CXTQ01000138
254857
Actinomycetota
CCG
Arg
>WENV170547645
CXTQ01000047
144700
Actinomycetota
CAT
Met
>WENV170547684
CXTQ01000391
295695
Actinomycetota
CTC
Glu
>WENV170547671
CXTQ01000193
235148
Actinomycetota
GTT
Asn
>WENV170547650
CXTQ01000056
235148
Actinomycetota
GTT
Asn
>WENV170547649
CXTQ01000056
235148
Actinomycetota
GTT
Asn
>WENV170547639
CXTQ01000025
53078
Actinomycetota
GGA
Ser
>WENV170547643
CXTQ01000045
144825
Actinomycetota
CAT
Met
>WENV170547647
CXTQ01000050
119508
Actinomycetota
TAA
Leu
>WENV170547653
CXTQ01000069
235348
Actinomycetota
CCT
Arg
>WENV170547660
CXTQ01000082
113601
Actinomycetota
TAG
Leu
>WENV170547670
CXTQ01000188
144595
Actinomycetota
CAA
Leu
>WENV170547652
CXTQ01000066
45852
Actinomycetota
CGA
Ser
>WENV170547679
CXTQ01000261
80622
Actinomycetota
CAG
Leu
>WENV170547677
CXTQ01000246
16222
Actinomycetota
GAG
Leu
>WENV170547644
CXTQ01000047
95593
Actinomycetota
>WENV170547637
CXTQ01000016
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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