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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170549321
CXUZ01000032
235347
Actinomycetota
GGC
Ala
>WENV170549322
CXUZ01000032
235347
Actinomycetota
GGC
Ala
>WENV170549306
CXUZ01000013
201717
Actinomycetota
CTT
Lys
>WENV170549326
CXUZ01000049
144600
Actinomycetota
TGG
Pro
>WENV170549311
CXUZ01000025
235194
Actinomycetota
GTG
His
>WENV170549327
CXUZ01000052
158720
Actinomycetota
ACG
Arg
>WENV170549333
CXUZ01000122
158720
Actinomycetota
ACG
Arg
>WENV170549334
CXUZ01000122
158720
Actinomycetota
ACG
Arg
>WENV170549318
CXUZ01000028
144826
Actinomycetota
GGG
Pro
>WENV170549293
CXUZ01000003
23370
Actinomycetota
GCT
Ser
>WENV170549303
CXUZ01000010
174149
Actinomycetota
GAT
Ile
>WENV170549298
CXUZ01000004
338239
Actinomycetota
TTC
Glu
>WENV170549304
CXUZ01000010
235174
Actinomycetota
TGC
Ala
>WENV170549305
CXUZ01000013
235101
Actinomycetota
TTT
Lys
>WENV170549315
CXUZ01000028
356045
Actinomycetota
GAC
Val
>WENV170549289
CXUZ01000003
356045
Actinomycetota
GAC
Val
>WENV170549310
CXUZ01000025
145345
Actinomycetota
TAC
Val
>WENV170549316
CXUZ01000028
235199
Actinomycetota
CAC
Val
>WENV170549290
CXUZ01000003
235199
Actinomycetota
CAC
Val
>WENV170549331
CXUZ01000069
313386
Actinomycetota
CGT
Thr
>WENV170549329
CXUZ01000054
367535
Actinomycetota
CTG
Gln
>WENV170549320
CXUZ01000032
413665
Actinomycetota
TTG
Gln
>WENV170549300
CXUZ01000005
45154
Actinomycetota
TGA
Ser
>WENV170549284
CXUZ01000001
254857
Actinomycetota
CCG
Arg
>WENV170549292
CXUZ01000003
144700
Actinomycetota
CAT
Met
>WENV170549328
CXUZ01000054
295695
Actinomycetota
CTC
Glu
>WENV170549309
CXUZ01000016
235148
Actinomycetota
GTT
Asn
>WENV170549308
CXUZ01000016
235148
Actinomycetota
GTT
Asn
>WENV170549330
CXUZ01000056
53078
Actinomycetota
GGA
Ser
>WENV170549296
CXUZ01000004
144825
Actinomycetota
CAT
Met
>WENV170549324
CXUZ01000047
119508
Actinomycetota
TAA
Leu
>WENV170549297
CXUZ01000004
235348
Actinomycetota
CCT
Arg
>WENV170549332
CXUZ01000069
113601
Actinomycetota
TAG
Leu
>WENV170549325
CXUZ01000049
144595
Actinomycetota
CAA
Leu
>WENV170549287
CXUZ01000002
431657
Actinomycetota
CCC
Gly
>WENV170549299
CXUZ01000005
45852
Actinomycetota
CGA
Ser
>WENV170549286
CXUZ01000002
80622
Actinomycetota
CAG
Leu
>WENV170549319
CXUZ01000030
16222
Actinomycetota
GAG
Leu
>WENV170549291
CXUZ01000003
95593
Actinomycetota
>WENV170549301
CXUZ01000008
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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