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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170550186
CXVQ01000048
235347
Actinomycetota
GGC
Ala
>WENV170550187
CXVQ01000048
235347
Actinomycetota
GGC
Ala
>WENV170550191
CXVQ01000049
201717
Actinomycetota
CTT
Lys
>WENV170550183
CXVQ01000044
144600
Actinomycetota
TGG
Pro
>WENV170550166
CXVQ01000024
235194
Actinomycetota
GTG
His
>WENV170550188
CXVQ01000048
158720
Actinomycetota
ACG
Arg
>WENV170550189
CXVQ01000048
158720
Actinomycetota
ACG
Arg
>WENV170550177
CXVQ01000038
144826
Actinomycetota
GGG
Pro
>WENV170550199
CXVQ01000067
23370
Actinomycetota
GCT
Ser
>WENV170550159
CXVQ01000008
174149
Actinomycetota
GAT
Ile
>WENV170550185
CXVQ01000045
338239
Actinomycetota
TTC
Glu
>WENV170550160
CXVQ01000008
235174
Actinomycetota
TGC
Ala
>WENV170550190
CXVQ01000049
235101
Actinomycetota
TTT
Lys
>WENV170550174
CXVQ01000038
356045
Actinomycetota
GAC
Val
>WENV170550169
CXVQ01000029
356045
Actinomycetota
GAC
Val
>WENV170550171
CXVQ01000033
145345
Actinomycetota
TAC
Val
>WENV170550207
CXVQ01000237
235199
Actinomycetota
CAC
Val
>WENV170550204
CXVQ01000182
235199
Actinomycetota
CAC
Val
>WENV170550175
CXVQ01000038
235199
Actinomycetota
CAC
Val
>WENV170550170
CXVQ01000029
235199
Actinomycetota
CAC
Val
>WENV170550202
CXVQ01000111
313386
Actinomycetota
CGT
Thr
>WENV170550162
CXVQ01000010
367535
Actinomycetota
CTG
Gln
>WENV170550201
CXVQ01000098
413665
Actinomycetota
TTG
Gln
>WENV170550200
CXVQ01000073
45154
Actinomycetota
TGA
Ser
>WENV170550153
CXVQ01000005
254857
Actinomycetota
CCG
Arg
>WENV170550198
CXVQ01000067
144700
Actinomycetota
CAT
Met
>WENV170550161
CXVQ01000010
295695
Actinomycetota
CTC
Glu
>WENV170550179
CXVQ01000038
235148
Actinomycetota
GTT
Asn
>WENV170550178
CXVQ01000038
235148
Actinomycetota
GTT
Asn
>WENV170550195
CXVQ01000062
53078
Actinomycetota
GGA
Ser
>WENV170550157
CXVQ01000006
144825
Actinomycetota
CAT
Met
>WENV170550180
CXVQ01000039
119508
Actinomycetota
TAA
Leu
>WENV170550158
CXVQ01000006
235348
Actinomycetota
CCT
Arg
>WENV170550203
CXVQ01000111
113601
Actinomycetota
TAG
Leu
>WENV170550182
CXVQ01000044
144595
Actinomycetota
CAA
Leu
>WENV170550193
CXVQ01000060
431657
Actinomycetota
CCC
Gly
>WENV170550164
CXVQ01000017
45852
Actinomycetota
CGA
Ser
>WENV170550194
CXVQ01000060
80622
Actinomycetota
CAG
Leu
>WENV170550167
CXVQ01000026
16222
Actinomycetota
GAG
Leu
>WENV170550197
CXVQ01000067
95593
Actinomycetota
>WENV170550163
CXVQ01000015
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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