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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170551322
CXWJ01004211
186087
Betaproteobacteria
GGG
Pro
>WENV170551367
CXWJ01005592
256200
Betaproteobacteria
CGT
Thr
>WENV170551377
CXWJ01005966
152292
Betaproteobacteria
TTG
Gln
>WENV170551805
CXWJ01023969
152292
Betaproteobacteria
TTG
Gln
>WENV170552160
CXWJ01041977
152292
Betaproteobacteria
TTG
Gln
>WENV170552301
CXWJ01053815
152292
Betaproteobacteria
TTG
Gln
>WENV170552066
CXWJ01036607
173491
Betaproteobacteria
TCT
Arg
>WENV170551207
CXWJ01001373
307571
Betaproteobacteria
CGC
Ala
>WENV170551538
CXWJ01011550
251462
Betaproteobacteria
GCC
Gly
>WENV170551336
CXWJ01004772
313235
Betaproteobacteria
TTC
Glu
>WENV170551300
CXWJ01003371
313235
Betaproteobacteria
TTC
Glu
>WENV170551272
CXWJ01002677
313235
Betaproteobacteria
TTC
Glu
>WENV170551610
CXWJ01014976
301533
Betaproteobacteria
GTG
His
>WENV170551345
CXWJ01005130
243641
Betaproteobacteria
TAC
Val
>WENV170552229
CXWJ01047964
96247
Betaproteobacteria
GAG
Leu
>WENV170552091
CXWJ01038235
146726
Betaproteobacteria
TCT
Arg
>WENV170551260
CXWJ01002466
146726
Betaproteobacteria
TCT
Arg
>WENV170552129
CXWJ01040928
59085
Betaproteobacteria
TAG
Leu
>WENV170551739
CXWJ01020083
59085
Betaproteobacteria
TAG
Leu
>WENV170551442
CXWJ01007810
245575
Betaproteobacteria
CGT
Thr
>WENV170551441
CXWJ01007809
245575
Betaproteobacteria
CGT
Thr
>WENV170551353
CXWJ01005295
153173
Betaproteobacteria
CAT
Met
>WENV170551508
CXWJ01010259
237326
Betaproteobacteria
CTT
Lys
>WENV170552111
CXWJ01039566
147666
Betaproteobacteria
CAT
Met
>WENV170551561
CXWJ01012230
147666
Betaproteobacteria
CAT
Met
>WENV170551154
CXWJ01000616
147666
Betaproteobacteria
CAT
Met
>WENV170551950
CXWJ01031387
144934
Betaproteobacteria
TTG
Gln
>WENV170551295
CXWJ01003224
237240
Betaproteobacteria
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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