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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170574206
FLYM01013723
345675
Thermoproteota
GGC
Ala
>WENV170574085
FLYM01004469
258376
Thermoproteota
>WENV170574045
FLYM01000977
45245
Thermoproteota
>WENV170574051
FLYM01002040
45245
Thermoproteota
>WENV170574086
FLYM01004469
45245
Thermoproteota
>WENV170574089
FLYM01004625
45245
Thermoproteota
>WENV170574218
FLYM01014615
129953
Thermoproteota
>WENV170574144
FLYM01008784
47725
Thermoproteota
GGA
Ser
>WENV170574186
FLYM01011988
199240
Thermoproteota
CAT
Met
>WENV170574114
FLYM01006966
130043
Thermoproteota
TTT
Lys
>WENV170574104
FLYM01005709
130040
Thermoproteota
>WENV170574112
FLYM01006892
353377
Thermoproteota
>WENV170574164
FLYM01010181
166388
Thermoproteota
CCA
Trp
>WENV170574352
FLYM01028230
50263
Thermoproteota
>WENV170574122
FLYM01007773
50263
Thermoproteota
>WENV170574183
FLYM01011831
147523
Thermoproteota
>WENV170574048
FLYM01001574
45244
Thermoproteota
>WENV170574145
FLYM01008784
45243
Thermoproteota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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