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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180016184
FSUF01000001
243559
Actinomycetota
TTT
Lys
>WENV180016208
FSUF01000905
338763
Actinomycetota
GCC
Gly
>WENV180016185
FSUF01000022
417127
Actinomycetota
CCC
Gly
>WENV180016228
FSUF01001537
237877
Actinomycetota
CGT
Thr
>WENV180016190
FSUF01000129
237597
Actinomycetota
CGT
Thr
>WENV180016231
FSUF01001582
146611
Actinomycetota
CGG
Pro
>WENV180016235
FSUF01001663
236241
Actinomycetota
TAC
Val
>WENV180016203
FSUF01000618
153188
Actinomycetota
CAT
Met
>WENV180016220
FSUF01001345
162292
Actinomycetota
GGG
Pro
>WENV180016186
FSUF01000096
159454
Actinomycetota
CAT
Met
>WENV180016205
FSUF01000808
258960
Actinomycetota
CTC
Glu
>WENV180016189
FSUF01000127
149979
Actinomycetota
TGT
Thr
>WENV180016196
FSUF01000304
52003
Actinomycetota
GAG
Leu
>WENV180016237
FSUF01001676
251503
Actinomycetota
GTT
Asn
>WENV180016230
FSUF01001577
152456
Actinomycetota
CAT
Met
>WENV180016201
FSUF01000558
152456
Actinomycetota
CAT
Met
>WENV180016199
FSUF01000354
152456
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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