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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180030618
FTJN01001231
152292
Betaproteobacteria
TTG
Gln
>WENV180030931
FTJN01535133
238654
Betaproteobacteria
TGT
Thr
>WENV180030948
FTJN01684519
238654
Betaproteobacteria
TGT
Thr
>WENV180030740
FTJN01008157
400411
Betaproteobacteria
GGT
Thr
>WENV180030662
FTJN01002311
178702
Betaproteobacteria
CAT
Met
>WENV180030851
FTJN01184163
178702
Betaproteobacteria
CAT
Met
>WENV180030603
FTJN01000837
59085
Betaproteobacteria
TAG
Leu
>WENV180030588
FTJN01000580
154591
Betaproteobacteria
CAT
Met
>WENV180030989
FTJN01929904
153173
Betaproteobacteria
CAT
Met
>WENV180030728
FTJN01004612
246006
Betaproteobacteria
TTT
Lys
>WENV180030561
FTJN01000147
182616
Betaproteobacteria
CAT
Met
>WENV180030575
FTJN01000311
45127
Betaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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