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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180033610
FTKL01000419
241679
Actinomycetota
CTC
Glu
>WENV180033611
FTKL01000419
241679
Actinomycetota
CTC
Glu
>WENV180033612
FTKL01000419
241679
Actinomycetota
CTC
Glu
>WENV180033609
FTKL01000419
342772
Actinomycetota
CTG
Gln
>WENV180033613
FTKL01000419
342772
Actinomycetota
CTG
Gln
>WENV180033614
FTKL01000451
235626
Actinomycetota
GTG
His
>WENV180033615
FTKL01000451
235626
Actinomycetota
GTG
His
>WENV180033603
FTKL01000395
44902
Actinomycetota
GGA
Ser
>WENV180033645
FTKL01001019
58793
Actinomycetota
CAG
Leu
>WENV180033596
FTKL01000323
235734
Actinomycetota
>WENV180033648
FTKL01001040
148204
Actinomycetota
CGC
Ala
>WENV180033586
FTKL01000217
148204
Actinomycetota
CGC
Ala
>WENV180033876
FTKL01582665
338415
Actinomycetota
CAC
Val
>WENV180033875
FTKL01582665
338415
Actinomycetota
CAC
Val
>WENV180033879
FTKL01582703
23635
Actinomycetota
CGA
Ser
>WENV180033686
FTKL01008099
23635
Actinomycetota
CGA
Ser
>WENV180033844
FTKL01501063
240069
Actinomycetota
TTC
Glu
>WENV180033600
FTKL01000384
411681
Actinomycetota
GCA
Cys
>WENV180033855
FTKL01531221
235651
Actinomycetota
GGT
Thr
>WENV180033700
FTKL01016096
235651
Actinomycetota
GGT
Thr
>WENV180033711
FTKL01028964
147090
Actinomycetota
TGT
Thr
>WENV180033647
FTKL01001036
145077
Actinomycetota
CGT
Thr
>WENV180033604
FTKL01000399
145077
Actinomycetota
CGT
Thr
>WENV180033636
FTKL01000778
147739
Actinomycetota
CAT
Met
>WENV180033608
FTKL01000412
147739
Actinomycetota
CAT
Met
>WENV180033591
FTKL01000242
147739
Actinomycetota
CAT
Met
>WENV180033590
FTKL01000240
147739
Actinomycetota
CAT
Met
>WENV180033625
FTKL01000583
44903
Actinomycetota
GAG
Leu
>WENV180033616
FTKL01000459
44903
Actinomycetota
GAG
Leu
>WENV180033605
FTKL01000403
152011
Actinomycetota
TGG
Pro
>WENV180033617
FTKL01000485
4682
Actinomycetota
GCT
Ser
>WENV180033794
FTKL01216893
237649
Actinomycetota
ACG
Arg
>WENV180033618
FTKL01000485
237649
Actinomycetota
ACG
Arg
>WENV180033809
FTKL01315873
239051
Actinomycetota
>WENV180033656
FTKL01001258
412536
Actinomycetota
CCC
Gly
>WENV180033592
FTKL01000247
412536
Actinomycetota
CCC
Gly
>WENV180033577
FTKL01000075
144906
Actinomycetota
CTT
Lys
>WENV180033576
FTKL01000075
144906
Actinomycetota
CTT
Lys
>WENV180033573
FTKL01000061
144906
Actinomycetota
CTT
Lys
>WENV180033572
FTKL01000061
144906
Actinomycetota
CTT
Lys
>WENV180033845
FTKL01501063
152010
Actinomycetota
GTC
Asp
>WENV180033633
FTKL01000693
152010
Actinomycetota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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