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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170709566
LNFM01000478
152317
Gammaproteobacteria
CAT
Met
>WENV170709867
LNFM01000825
235837
Gammaproteobacteria
GTT
Asn
>WENV170711226
LNFM01004115
235837
Gammaproteobacteria
GTT
Asn
>WENV170709378
LNFM01000295
147373
Gammaproteobacteria
CAT
Met
>WENV170711077
LNFM01003450
147373
Gammaproteobacteria
CAT
Met
>WENV170711084
LNFM01003489
7214
Gammaproteobacteria
GCT
Ser
>WENV170712011
LNFM01009076
23626
Gammaproteobacteria
TGA
Ser
>WENV170709691
LNFM01000593
412176
Gammaproteobacteria
CCC
Gly
>WENV170709879
LNFM01000844
412176
Gammaproteobacteria
CCC
Gly
>WENV170710648
LNFM01002293
26080
Gammaproteobacteria
GGA
Ser
>WENV170715045
LNFM01128067
144981
Gammaproteobacteria
CCG
Arg
>WENV170712476
LNFM01013795
144981
Gammaproteobacteria
CCG
Arg
>WENV170711438
LNFM01005230
144981
Gammaproteobacteria
CCG
Arg
>WENV170710826
LNFM01002754
144979
Gammaproteobacteria
CGG
Pro
>WENV170714182
LNFM01059364
146923
Gammaproteobacteria
TGG
Pro
>WENV170712604
LNFM01015383
249963
Gammaproteobacteria
GGT
Thr
>WENV170711630
LNFM01006158
249963
Gammaproteobacteria
GGT
Thr
>WENV170713417
LNFM01030587
95750
Gammaproteobacteria
TAG
Leu
>WENV170712956
LNFM01021166
95635
Gammaproteobacteria
CAA
Leu
>WENV170713841
LNFM01044073
164812
Gammaproteobacteria
GAT
Ile
>WENV170713643
LNFM01037250
62501
Gammaproteobacteria
CAG
Leu
>WENV170713331
LNFM01028606
62501
Gammaproteobacteria
CAG
Leu
>WENV170711253
LNFM01004224
62501
Gammaproteobacteria
CAG
Leu
>WENV170711252
LNFM01004223
62501
Gammaproteobacteria
CAG
Leu
>WENV170712431
LNFM01013283
162437
Gammaproteobacteria
TCT
Arg
>WENV170709693
LNFM01000593
162437
Gammaproteobacteria
TCT
Arg
>WENV170711468
LNFM01005384
341782
Gammaproteobacteria
TTG
Gln
>WENV170710520
LNFM01001946
154796
Gammaproteobacteria
TCT
Arg
>WENV170711650
LNFM01006315
254364
Gammaproteobacteria
TTC
Glu
>WENV170710933
LNFM01003039
254364
Gammaproteobacteria
TTC
Glu
>WENV170710931
LNFM01003039
254364
Gammaproteobacteria
TTC
Glu
>WENV170710675
LNFM01002363
254364
Gammaproteobacteria
TTC
Glu
>WENV170710673
LNFM01002363
254364
Gammaproteobacteria
TTC
Glu
>WENV170709615
LNFM01000532
254364
Gammaproteobacteria
TTC
Glu
>WENV170709613
LNFM01000532
254364
Gammaproteobacteria
TTC
Glu
>WENV170713398
LNFM01030239
247088
Gammaproteobacteria
CCA
Trp
>WENV170711748
LNFM01007025
247088
Gammaproteobacteria
CCA
Trp
>WENV170712525
LNFM01014343
150297
Gammaproteobacteria
TCT
Arg
>WENV170713974
LNFM01048943
97679
Gammaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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