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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170743508
LULW01000276
96363
Cyanobacteriota
TAG
Leu
>WENV170743511
LULW01000282
23971
Cyanobacteriota
TGA
Ser
>WENV170743546
LULW01000408
310428
Cyanobacteriota
TGC
Ala
>WENV170743547
LULW01000410
144929
Cyanobacteriota
CAT
Met
>WENV170743552
LULW01000465
366531
Cyanobacteriota
TTG
Gln
>WENV170743553
LULW01000465
188100
Cyanobacteriota
CCG
Arg
>WENV170743561
LULW01000497
37357
Cyanobacteriota
TAA
Leu
>WENV170743572
LULW01000575
95762
Cyanobacteriota
AAG
Leu
>WENV170743598
LULW01000773
145761
Cyanobacteriota
GTC
Asp
>WENV170743604
LULW01000852
411836
Cyanobacteriota
TCC
Gly
>WENV170743690
LULW01001671
306125
Cyanobacteriota
GTG
His
>WENV170743700
LULW01001835
149253
Cyanobacteriota
ACG
Arg
>WENV170743703
LULW01001870
23971
Cyanobacteriota
TGA
Ser
>WENV170743765
LULW01003184
145893
Cyanobacteriota
CAT
Met
>WENV170743879
LULW01007139
240100
Cyanobacteriota
CAT
Met
>WENV170743890
LULW01007535
341034
Cyanobacteriota
GGT
Thr
>WENV170743930
LULW01009554
341034
Cyanobacteriota
GGT
Thr
>WENV170743969
LULW01011973
164907
Cyanobacteriota
GGG
Pro
>WENV170744083
LULW01020782
341034
Cyanobacteriota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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