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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170747214
LUMC01000105
366531
Cyanobacteriota
TTG
Gln
>WENV170747198
LUMC01000053
145761
Cyanobacteriota
GTC
Asp
>WENV170747315
LUMC01001164
164907
Cyanobacteriota
GGG
Pro
>WENV170747233
LUMC01000176
37357
Cyanobacteriota
TAA
Leu
>WENV170747193
LUMC01000033
96363
Cyanobacteriota
TAG
Leu
>WENV170747329
LUMC01001378
149253
Cyanobacteriota
ACG
Arg
>WENV170747299
LUMC01000961
363933
Cyanobacteriota
GTT
Asn
>WENV170747317
LUMC01001205
411836
Cyanobacteriota
TCC
Gly
>WENV170747249
LUMC01000329
252089
Cyanobacteriota
GTG
His
>WENV170747300
LUMC01001000
11030
Cyanobacteriota
GCT
Ser
>WENV170747418
LUMC01004447
240100
Cyanobacteriota
CAT
Met
>WENV170747232
LUMC01000174
95762
Cyanobacteriota
AAG
Leu
>WENV170747254
LUMC01000372
275577
Cyanobacteriota
TGC
Ala
>WENV170747215
LUMC01000105
188100
Cyanobacteriota
CCG
Arg
>WENV170747332
LUMC01001390
341034
Cyanobacteriota
GGT
Thr
>WENV170747316
LUMC01001168
145893
Cyanobacteriota
CAT
Met
>WENV170747197
LUMC01000053
275071
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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