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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170831673
MDSZ01048262
80875
Actinomycetota
GTA
Tyr
>WENV170843461
MDSZ01260959
105043
Actinomycetota
TAG
Leu
>WENV170843617
MDSZ01263452
240825
Actinomycetota
GTG
His
>WENV170838485
MDSZ01168715
413688
Actinomycetota
CCC
Gly
>WENV170838741
MDSZ01173609
45926
Actinomycetota
TGA
Ser
>WENV170840040
MDSZ01197125
235770
Actinomycetota
TCT
Arg
>WENV170830519
MDSZ01028442
148837
Actinomycetota
CAT
Met
>WENV170831719
MDSZ01049073
16376
Actinomycetota
CGA
Ser
>WENV170837978
MDSZ01159143
374962
Actinomycetota
CCT
Arg
>WENV170833525
MDSZ01081586
254605
Actinomycetota
TAA
Leu
>WENV170832223
MDSZ01057754
162173
Actinomycetota
TGG
Pro
>WENV170833185
MDSZ01075411
237513
Actinomycetota
ACG
Arg
>WENV170833970
MDSZ01089363
105186
Actinomycetota
TAG
Leu
>WENV170830518
MDSZ01028442
237593
Actinomycetota
GTT
Asn
>WENV170831962
MDSZ01053683
342999
Actinomycetota
GGT
Thr
>WENV170840567
MDSZ01206852
342999
Actinomycetota
GGT
Thr
>WENV170829246
MDSZ01005289
235768
Actinomycetota
CGT
Thr
>WENV170830459
MDSZ01027337
179547
Actinomycetota
GGG
Pro
>WENV170832819
MDSZ01069001
254606
Actinomycetota
CCG
Arg
>WENV170841737
MDSZ01228015
81941
Actinomycetota
CAG
Leu
>WENV170829199
MDSZ01004603
268346
Actinomycetota
GGC
Ala
>WENV170840568
MDSZ01206852
146888
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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