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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180052761
MPLU02323224
80917
Alphaproteobacteria
CAG
Leu
>WENV180049059
MPLU02031268
306070
Alphaproteobacteria
CCA
Trp
>WENV180049273
MPLU02048242
113700
Alphaproteobacteria
>WENV180052865
MPLU02330781
185438
Alphaproteobacteria
GAT
Ile
>WENV180050364
MPLU02132579
176908
Alphaproteobacteria
GTC
Asp
>WENV180050735
MPLU02164489
23671
Alphaproteobacteria
CGA
Ser
>WENV180052348
MPLU02290434
339723
Alphaproteobacteria
>WENV180050391
MPLU02134873
147083
Alphaproteobacteria
GGG
Pro
>WENV180051097
MPLU02188078
95928
Alphaproteobacteria
TAG
Leu
>WENV180052323
MPLU02288852
77433
Alphaproteobacteria
CAG
Leu
>WENV180050405
MPLU02136419
339722
Alphaproteobacteria
TTG
Gln
>WENV180050478
MPLU02142974
80918
Alphaproteobacteria
GAG
Leu
>WENV180051533
MPLU02221745
147334
Alphaproteobacteria
CAT
Met
>WENV180052398
MPLU02295131
157999
Alphaproteobacteria
TCT
Arg
>WENV180050229
MPLU02120066
113716
Alphaproteobacteria
CAA
Leu
>WENV180051710
MPLU02239646
412279
Alphaproteobacteria
CCC
Gly
>WENV180053135
MPLU02348736
28682
Alphaproteobacteria
GGA
Ser
>WENV180051222
MPLU02198688
23672
Alphaproteobacteria
GCT
Ser
>WENV180051661
MPLU02235540
164825
Alphaproteobacteria
GAT
Ile
>WENV180049576
MPLU02070291
412477
Alphaproteobacteria
GCA
Cys
>WENV180052842
MPLU02329308
338288
Alphaproteobacteria
TTC
Glu
>WENV180052841
MPLU02329308
338288
Alphaproteobacteria
TTC
Glu
>WENV180051284
MPLU02201596
319925
Alphaproteobacteria
TGT
Thr
>WENV180050424
MPLU02137926
412281
Alphaproteobacteria
CTG
Gln
>WENV180051982
MPLU02260940
113715
Alphaproteobacteria
TAG
Leu
>WENV180050608
MPLU02154238
150356
Alphaproteobacteria
GTC
Asp
>WENV180052162
MPLU02274355
236256
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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