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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180049386
MPLU02056448
318887
Gammaproteobacteria
GCC
Gly
>WENV180049387
MPLU02056448
318887
Gammaproteobacteria
GCC
Gly
>WENV180051858
MPLU02249278
318887
Gammaproteobacteria
GCC
Gly
>WENV180052203
MPLU02276302
318887
Gammaproteobacteria
GCC
Gly
>WENV180052316
MPLU02287946
313881
Gammaproteobacteria
GGC
Ala
>WENV180048836
MPLU02015667
147048
Gammaproteobacteria
CCA
Trp
>WENV180052505
MPLU02304667
236480
Gammaproteobacteria
GTG
His
>WENV180052772
MPLU02323563
17426
Gammaproteobacteria
GCT
Ser
>WENV180050385
MPLU02134178
147053
Gammaproteobacteria
GTT
Asn
>WENV180050386
MPLU02134178
147053
Gammaproteobacteria
GTT
Asn
>WENV180051353
MPLU02207420
147053
Gammaproteobacteria
GTT
Asn
>WENV180052552
MPLU02307416
147053
Gammaproteobacteria
GTT
Asn
>WENV180052553
MPLU02307416
147053
Gammaproteobacteria
GTT
Asn
>WENV180052205
MPLU02276302
59177
Gammaproteobacteria
TAA
Leu
>WENV180049303
MPLU02049920
237710
Gammaproteobacteria
TTT
Lys
>WENV180052446
MPLU02299395
149036
Gammaproteobacteria
CCA
Trp
>WENV180052204
MPLU02276302
435350
Gammaproteobacteria
GCA
Cys
>WENV180049041
MPLU02029936
322642
Gammaproteobacteria
GGT
Thr
>WENV180051859
MPLU02249278
413586
Gammaproteobacteria
GCA
Cys
>WENV180051348
MPLU02207367
147054
Gammaproteobacteria
CAT
Met
>WENV180049094
MPLU02033695
147054
Gammaproteobacteria
CAT
Met
>WENV180049927
MPLU02097542
237221
Gammaproteobacteria
GGC
Ala
>WENV180049096
MPLU02033695
349693
Gammaproteobacteria
TTG
Gln
>WENV180050081
MPLU02108836
412799
Gammaproteobacteria
GCA
Cys
>WENV180052577
MPLU02309790
241230
Gammaproteobacteria
GAA
Phe
>WENV180050949
MPLU02182328
289927
Gammaproteobacteria
GAA
Phe
>WENV180049093
MPLU02033695
377319
Gammaproteobacteria
TTG
Gln
>WENV180052506
MPLU02304667
97031
Gammaproteobacteria
TAG
Leu
>WENV180050588
MPLU02152506
8480
Gammaproteobacteria
GCT
Ser
>WENV180052738
MPLU02322222
149038
Gammaproteobacteria
TGG
Pro
>WENV180052507
MPLU02304667
149038
Gammaproteobacteria
TGG
Pro
>WENV180052504
MPLU02304667
149038
Gammaproteobacteria
TGG
Pro
>WENV180049876
MPLU02093376
152301
Gammaproteobacteria
GAT
Ile
>WENV180051615
MPLU02230957
147055
Gammaproteobacteria
TGG
Pro
>WENV180052581
MPLU02309790
240084
Gammaproteobacteria
GGT
Thr
>WENV180049095
MPLU02033695
99006
Gammaproteobacteria
TAG
Leu
>WENV180049029
MPLU02028964
96103
Gammaproteobacteria
CAA
Leu
>WENV180050316
MPLU02127155
237714
Gammaproteobacteria
TAC
Val
>WENV180050315
MPLU02127155
237714
Gammaproteobacteria
TAC
Val
>WENV180049929
MPLU02097542
237714
Gammaproteobacteria
TAC
Val
>WENV180051901
MPLU02252102
319098
Gammaproteobacteria
TAC
Val
>WENV180052579
MPLU02309790
108266
Gammaproteobacteria
GTA
Tyr
>WENV180050082
MPLU02108836
77137
Gammaproteobacteria
TAA
Leu
>WENV180052732
MPLU02321455
145713
Gammaproteobacteria
CAT
Met
>WENV180050085
MPLU02109109
411842
Gammaproteobacteria
GCA
Cys
>WENV180049895
MPLU02094375
195303
Gammaproteobacteria
GAT
Ile
>WENV180051962
MPLU02257860
243485
Gammaproteobacteria
TGT
Thr
>WENV180051212
MPLU02198220
249892
Gammaproteobacteria
GTT
Asn
>WENV180052774
MPLU02323563
203054
Gammaproteobacteria
ACG
Arg
>WENV180052773
MPLU02323563
203054
Gammaproteobacteria
ACG
Arg
>WENV180048723
MPLU02003826
16460
Gammaproteobacteria
TGA
Ser
>WENV180050590
MPLU02152506
147776
Gammaproteobacteria
ACG
Arg
>WENV180050589
MPLU02152506
147776
Gammaproteobacteria
ACG
Arg
>WENV180049230
MPLU02044871
288001
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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