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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV171003710
NNBV01000461
146896
Betaproteobacteria
TTG
Gln
>WENV171003785
NNBV01000771
303627
Betaproteobacteria
TTT
Lys
>WENV171003707
NNBV01000461
145694
Betaproteobacteria
ACG
Arg
>WENV171003708
NNBV01000461
145694
Betaproteobacteria
ACG
Arg
>WENV171003786
NNBV01000771
16378
Betaproteobacteria
GGA
Ser
>WENV171003791
NNBV01000827
308813
Betaproteobacteria
TAC
Val
>WENV171003825
NNBV01001393
412167
Betaproteobacteria
GCA
Cys
>WENV171003764
NNBV01000689
251202
Betaproteobacteria
TGT
Thr
>WENV171003701
NNBV01000411
95951
Betaproteobacteria
CAA
Leu
>WENV171003747
NNBV01000582
95934
Betaproteobacteria
GAG
Leu
>WENV171003726
NNBV01000549
339485
Betaproteobacteria
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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