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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180106946
OAPF01016008
147089
Alphaproteobacteria
ACG
Arg
>WENV180106762
OAPF01002343
256175
Alphaproteobacteria
TGT
Thr
>WENV180107071
OAPF01026323
176908
Alphaproteobacteria
GTC
Asp
>WENV180107288
OAPF01096995
282595
Alphaproteobacteria
CCA
Trp
>WENV180107398
OAPF01152288
338282
Alphaproteobacteria
GTT
Asn
>WENV180107312
OAPF01106966
340288
Alphaproteobacteria
GCC
Gly
>WENV180107025
OAPF01022356
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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