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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180106739
OAPF01001425
165001
Bacteroidota
GTT
Asn
>WENV180107000
OAPF01020042
306609
Bacteroidota
GAA
Phe
>WENV180106878
OAPF01009270
172532
Bacteroidota
GTC
Asp
>WENV180106778
OAPF01002941
154388
Bacteroidota
GTG
His
>WENV180107495
OAPF01203633
236125
Bacteroidota
GAA
Phe
>WENV180106708
OAPF01000676
364423
Bacteroidota
GGT
Thr
>WENV180106740
OAPF01001540
161616
Bacteroidota
CAT
Met
>WENV180107541
OAPF01236594
44938
Bacteroidota
TGA
Ser
>WENV180106854
OAPF01007410
290994
Bacteroidota
CAT
Met
>WENV180106786
OAPF01003184
159518
Bacteroidota
GAT
Ile
>WENV180106923
OAPF01013435
139565
Bacteroidota
TGG
Pro
>WENV180107028
OAPF01022488
309421
Bacteroidota
TCC
Gly
>WENV180107215
OAPF01064554
240901
Bacteroidota
TTT
Lys
>WENV180106869
OAPF01008179
235746
Bacteroidota
GAA
Phe
>WENV180107140
OAPF01040279
360599
Bacteroidota
GGT
Thr
>WENV180107403
OAPF01155234
48914
Bacteroidota
TGA
Ser
>WENV180107342
OAPF01128776
110457
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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