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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180109342
OAPJ01085867
165001
Bacteroidota
GTT
Asn
>WENV180109173
OAPJ01019060
139286
Bacteroidota
TGG
Pro
>WENV180109065
OAPJ01002993
306609
Bacteroidota
GAA
Phe
>WENV180109329
OAPJ01081276
238765
Bacteroidota
GCC
Gly
>WENV180109312
OAPJ01073691
309582
Bacteroidota
TTT
Lys
>WENV180109153
OAPJ01015140
338625
Bacteroidota
TTC
Glu
>WENV180109056
OAPJ01001968
364423
Bacteroidota
GGT
Thr
>WENV180109174
OAPJ01019284
322068
Bacteroidota
TCC
Gly
>WENV180109272
OAPJ01055307
127288
Bacteroidota
TGG
Pro
>WENV180109121
OAPJ01009863
341598
Bacteroidota
GCC
Gly
>WENV180109083
OAPJ01004986
44938
Bacteroidota
TGA
Ser
>WENV180109309
OAPJ01073006
95727
Bacteroidota
TAG
Leu
>WENV180109064
OAPJ01002788
235802
Bacteroidota
CAT
Met
>WENV180109081
OAPJ01004831
341465
Bacteroidota
TTC
Glu
>WENV180109143
OAPJ01014445
347866
Bacteroidota
TTC
Glu
>WENV180109275
OAPJ01056831
146530
Bacteroidota
TGT
Thr
>WENV180109206
OAPJ01028894
127449
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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