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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180109345
OAPJ01087768
318887
Gammaproteobacteria
GCC
Gly
>WENV180109284
OAPJ01060875
312287
Gammaproteobacteria
TGT
Thr
>WENV180109356
OAPJ01093360
235449
Gammaproteobacteria
>WENV180109093
OAPJ01005842
236480
Gammaproteobacteria
GTG
His
>WENV180109179
OAPJ01020532
147053
Gammaproteobacteria
GTT
Asn
>WENV180109125
OAPJ01010588
269248
Gammaproteobacteria
CCA
Trp
>WENV180109225
OAPJ01035597
185163
Gammaproteobacteria
ACG
Arg
>WENV180109212
OAPJ01030238
114020
Gammaproteobacteria
GTA
Tyr
>WENV180109160
OAPJ01017199
240619
Gammaproteobacteria
TGT
Thr
>WENV180109090
OAPJ01005541
149036
Gammaproteobacteria
CCA
Trp
>WENV180109213
OAPJ01030238
341109
Gammaproteobacteria
TCC
Gly
>WENV180109042
OAPJ01001139
144952
Gammaproteobacteria
GAT
Ile
>WENV180109297
OAPJ01068911
147054
Gammaproteobacteria
CAT
Met
>WENV180109296
OAPJ01068911
349693
Gammaproteobacteria
TTG
Gln
>WENV180109307
OAPJ01071445
412799
Gammaproteobacteria
GCA
Cys
>WENV180109094
OAPJ01005842
97031
Gammaproteobacteria
TAG
Leu
>WENV180109095
OAPJ01005842
149038
Gammaproteobacteria
TGG
Pro
>WENV180109145
OAPJ01014622
96362
Gammaproteobacteria
TAG
Leu
>WENV180109108
OAPJ01007913
59830
Gammaproteobacteria
CAA
Leu
>WENV180109304
OAPJ01069834
237708
Gammaproteobacteria
GCC
Gly
>WENV180109197
OAPJ01025399
319098
Gammaproteobacteria
TAC
Val
>WENV180109124
OAPJ01010173
144915
Gammaproteobacteria
CCG
Arg
>WENV180109308
OAPJ01071445
77137
Gammaproteobacteria
TAA
Leu
>WENV180109034
OAPJ01000481
250885
Gammaproteobacteria
TGC
Ala
>WENV180109078
OAPJ01004484
149037
Gammaproteobacteria
GAC
Val
>WENV180109146
OAPJ01014622
396552
Gammaproteobacteria
TTG
Gln
>WENV180109295
OAPJ01068911
95974
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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