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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180138287
OATQ01000006
338148
Actinomycetota
CTG
Gln
>WENV180138288
OATQ01000006
235121
Actinomycetota
CGT
Thr
>WENV180138289
OATQ01000006
113601
Actinomycetota
TAG
Leu
>WENV180138292
OATQ01000006
98279
Actinomycetota
GTA
Tyr
>WENV180138294
OATQ01000006
44942
Actinomycetota
TGA
Ser
>WENV180138297
OATQ01000006
145269
Actinomycetota
CAT
Met
>WENV180138301
OATQ01000006
16467
Actinomycetota
GCT
Ser
>WENV180138310
OATQ01000009
235148
Actinomycetota
GTT
Asn
>WENV180138311
OATQ01000009
235148
Actinomycetota
GTT
Asn
>WENV180138312
OATQ01000009
235173
Actinomycetota
GGC
Ala
>WENV180138313
OATQ01000009
235148
Actinomycetota
GTT
Asn
>WENV180138315
OATQ01000009
145343
Actinomycetota
GGG
Pro
>WENV180138331
OATQ01000013
235101
Actinomycetota
TTT
Lys
>WENV180138332
OATQ01000013
80622
Actinomycetota
CAG
Leu
>WENV180138334
OATQ01000013
235174
Actinomycetota
TGC
Ala
>WENV180138335
OATQ01000013
235173
Actinomycetota
GGC
Ala
>WENV180138337
OATQ01000013
411554
Actinomycetota
CCC
Gly
>WENV180138356
OATQ01000021
254857
Actinomycetota
CCG
Arg
>WENV180138359
OATQ01000023
145345
Actinomycetota
TAC
Val
>WENV180138360
OATQ01000024
145423
Actinomycetota
TCT
Arg
>WENV180138361
OATQ01000024
144589
Actinomycetota
ACG
Arg
>WENV180138362
OATQ01000024
144589
Actinomycetota
ACG
Arg
>WENV180138363
OATQ01000024
278447
Actinomycetota
GTG
His
>WENV180138419
OATQ01000074
16223
Actinomycetota
GAG
Leu
>WENV180138422
OATQ01000082
119485
Actinomycetota
TAA
Leu
>WENV180138423
OATQ01000082
145347
Actinomycetota
CAA
Leu
>WENV180138424
OATQ01000082
144635
Actinomycetota
TGG
Pro
>WENV180138513
OATQ01000273
235153
Actinomycetota
CCT
Arg
>WENV180138558
OATQ01000461
245301
Actinomycetota
GCC
Gly
>WENV180138559
OATQ01000461
412834
Actinomycetota
GCA
Cys
>WENV180138560
OATQ01000461
245301
Actinomycetota
GCC
Gly
>WENV180138561
OATQ01000461
245301
Actinomycetota
GCC
Gly
>WENV180138581
OATQ01000551
153948
Actinomycetota
GGG
Pro
>WENV180138586
OATQ01000602
338139
Actinomycetota
GTT
Asn
>WENV180138587
OATQ01000602
338139
Actinomycetota
GTT
Asn
>WENV180138592
OATQ01000670
235149
Actinomycetota
CCT
Arg
>WENV180138599
OATQ01000737
158513
Actinomycetota
TGG
Pro
>WENV180138631
OATQ01000943
414234
Actinomycetota
CTG
Gln
>WENV180138638
OATQ01001059
144636
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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