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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180139843
OATT01001116
235146
Actinomycetota
CGT
Thr
>WENV180139856
OATT01001253
235347
Actinomycetota
GGC
Ala
>WENV180139857
OATT01001253
235347
Actinomycetota
GGC
Ala
>WENV180139808
OATT01000978
3239
Actinomycetota
GCT
Ser
>WENV180139791
OATT01000909
201717
Actinomycetota
CTT
Lys
>WENV180139991
OATT01002712
235194
Actinomycetota
GTG
His
>WENV180139841
OATT01001116
273786
Actinomycetota
CGT
Thr
>WENV180139982
OATT01002666
158720
Actinomycetota
ACG
Arg
>WENV180139981
OATT01002666
158720
Actinomycetota
ACG
Arg
>WENV180139952
OATT01002170
411601
Actinomycetota
CCC
Gly
>WENV180139844
OATT01001156
144826
Actinomycetota
GGG
Pro
>WENV180139939
OATT01002058
23370
Actinomycetota
GCT
Ser
>WENV180140076
OATT01005656
174149
Actinomycetota
GAT
Ile
>WENV180139928
OATT01001989
338239
Actinomycetota
TTC
Glu
>WENV180140077
OATT01005656
235174
Actinomycetota
TGC
Ala
>WENV180139727
OATT01000709
121510
Actinomycetota
TAA
Leu
>WENV180139910
OATT01001649
356045
Actinomycetota
GAC
Val
>WENV180139899
OATT01001577
356045
Actinomycetota
GAC
Val
>WENV180139954
OATT01002245
44855
Actinomycetota
TGA
Ser
>WENV180140297
OATT01033449
145345
Actinomycetota
TAC
Val
>WENV180139911
OATT01001649
235199
Actinomycetota
CAC
Val
>WENV180139900
OATT01001577
235199
Actinomycetota
CAC
Val
>WENV180139893
OATT01001489
44862
Actinomycetota
CGA
Ser
>WENV180139855
OATT01001253
413665
Actinomycetota
TTG
Gln
>WENV180139876
OATT01001391
254857
Actinomycetota
CCG
Arg
>WENV180139825
OATT01001031
144700
Actinomycetota
CAT
Met
>WENV180139891
OATT01001480
295695
Actinomycetota
CTC
Glu
>WENV180139892
OATT01001480
338148
Actinomycetota
CTG
Gln
>WENV180140129
OATT01007821
235148
Actinomycetota
GTT
Asn
>WENV180140128
OATT01007821
235148
Actinomycetota
GTT
Asn
>WENV180140127
OATT01007821
235148
Actinomycetota
GTT
Asn
>WENV180139973
OATT01002405
53078
Actinomycetota
GGA
Ser
>WENV180139809
OATT01000978
338238
Actinomycetota
CCA
Trp
>WENV180139802
OATT01000938
144825
Actinomycetota
CAT
Met
>WENV180139764
OATT01000804
235348
Actinomycetota
CCT
Arg
>WENV180139842
OATT01001116
113601
Actinomycetota
TAG
Leu
>WENV180139767
OATT01000822
144595
Actinomycetota
CAA
Leu
>WENV180139766
OATT01000822
163764
Actinomycetota
TGG
Pro
>WENV180140075
OATT01005583
80622
Actinomycetota
CAG
Leu
>WENV180139913
OATT01001653
16222
Actinomycetota
GAG
Leu
>WENV180139877
OATT01001397
144660
Actinomycetota
TAC
Val
>WENV180139824
OATT01001031
95593
Actinomycetota
>WENV180139920
OATT01001767
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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