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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180139311
OATT01000013
235097
Bacteroidota
TTT
Lys
>WENV180139559
OATT01000356
235102
Bacteroidota
CGT
Thr
>WENV180139372
OATT01000052
338155
Bacteroidota
CTC
Glu
>WENV180139279
OATT01000001
415410
Bacteroidota
TTG
Gln
>WENV180139294
OATT01000006
415410
Bacteroidota
TTG
Gln
>WENV180139293
OATT01000004
338124
Bacteroidota
CCG
Arg
>WENV180139426
OATT01000110
338132
Bacteroidota
GCA
Cys
>WENV180139429
OATT01000112
338132
Bacteroidota
GCA
Cys
>WENV180139291
OATT01000004
193809
Bacteroidota
CAT
Met
>WENV180139800
OATT01000933
301449
Bacteroidota
CGG
Pro
>WENV180139397
OATT01000076
301449
Bacteroidota
CGG
Pro
>WENV180139682
OATT01000608
144933
Bacteroidota
TCT
Arg
>WENV180139364
OATT01000047
144656
Bacteroidota
GTG
His
>WENV180139409
OATT01000094
235207
Bacteroidota
CAT
Met
>WENV180139425
OATT01000110
144596
Bacteroidota
GGC
Ala
>WENV180139993
OATT01002754
80607
Bacteroidota
GTA
Tyr
>WENV180139464
OATT01000166
80607
Bacteroidota
GTA
Tyr
>WENV180139375
OATT01000056
80607
Bacteroidota
GTA
Tyr
>WENV180139296
OATT01000007
80607
Bacteroidota
GTA
Tyr
>WENV180139687
OATT01000609
113604
Bacteroidota
>WENV180139684
OATT01000609
113604
Bacteroidota
>WENV180139492
OATT01000219
16999
Bacteroidota
GGA
Ser
>WENV180139699
OATT01000645
52358
Bacteroidota
TGA
Ser
>WENV180139577
OATT01000385
52358
Bacteroidota
TGA
Ser
>WENV180139433
OATT01000119
52358
Bacteroidota
TGA
Ser
>WENV180139403
OATT01000090
52358
Bacteroidota
TGA
Ser
>WENV180139300
OATT01000007
144590
Bacteroidota
GTT
Asn
>WENV180139299
OATT01000007
144590
Bacteroidota
GTT
Asn
>WENV180139462
OATT01000164
95559
Bacteroidota
TAG
Leu
>WENV180139443
OATT01000132
419272
Bacteroidota
CTG
Gln
>WENV180139753
OATT01000777
144655
Bacteroidota
GGC
Ala
>WENV180139277
OATT01000001
44852
Bacteroidota
TAA
Leu
>WENV180139518
OATT01000259
132360
Bacteroidota
GGG
Pro
>WENV180139327
OATT01000019
425638
Bacteroidota
CTG
Gln
>WENV180139371
OATT01000052
23696
Bacteroidota
GCT
Ser
>WENV180139365
OATT01000047
16224
Bacteroidota
GGA
Ser
>WENV180139444
OATT01000132
16220
Bacteroidota
GGA
Ser
>WENV180139283
OATT01000002
338125
Bacteroidota
CCT
Arg
>WENV180139278
OATT01000001
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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