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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180180271
OAWK01000029
235146
Actinomycetota
CGT
Thr
>WENV180180246
OAWK01000017
235347
Actinomycetota
GGC
Ala
>WENV180180247
OAWK01000017
235347
Actinomycetota
GGC
Ala
>WENV180180241
OAWK01000015
166493
Actinomycetota
CTT
Lys
>WENV180180272
OAWK01000029
166750
Actinomycetota
CAT
Met
>WENV180180420
OAWK01000231
3239
Actinomycetota
GCT
Ser
>WENV180180213
OAWK01000009
235194
Actinomycetota
GTG
His
>WENV180180250
OAWK01000017
158720
Actinomycetota
ACG
Arg
>WENV180180249
OAWK01000017
158720
Actinomycetota
ACG
Arg
>WENV180180409
OAWK01000197
411601
Actinomycetota
CCC
Gly
>WENV180180435
OAWK01000379
144826
Actinomycetota
GGG
Pro
>WENV180180292
OAWK01000045
23370
Actinomycetota
GCT
Ser
>WENV180180322
OAWK01000066
174149
Actinomycetota
GAT
Ile
>WENV180180214
OAWK01000010
338239
Actinomycetota
TTC
Glu
>WENV180180323
OAWK01000066
235174
Actinomycetota
TGC
Ala
>WENV180180240
OAWK01000015
235101
Actinomycetota
TTT
Lys
>WENV180180212
OAWK01000009
121510
Actinomycetota
TAA
Leu
>WENV180180328
OAWK01000067
356045
Actinomycetota
GAC
Val
>WENV180180267
OAWK01000029
356045
Actinomycetota
GAC
Val
>WENV180180294
OAWK01000045
44855
Actinomycetota
TGA
Ser
>WENV180180329
OAWK01000067
235199
Actinomycetota
CAC
Val
>WENV180180268
OAWK01000029
235199
Actinomycetota
CAC
Val
>WENV180180293
OAWK01000045
44862
Actinomycetota
CGA
Ser
>WENV180180245
OAWK01000017
413665
Actinomycetota
TTG
Gln
>WENV180180265
OAWK01000029
254857
Actinomycetota
CCG
Arg
>WENV180180291
OAWK01000045
144700
Actinomycetota
CAT
Met
>WENV180180238
OAWK01000015
243671
Actinomycetota
CTC
Glu
>WENV180180404
OAWK01000169
235148
Actinomycetota
GTT
Asn
>WENV180180324
OAWK01000067
235148
Actinomycetota
GTT
Asn
>WENV180180421
OAWK01000231
338238
Actinomycetota
CCA
Trp
>WENV180180217
OAWK01000010
144825
Actinomycetota
CAT
Met
>WENV180180218
OAWK01000010
235348
Actinomycetota
CCT
Arg
>WENV180180270
OAWK01000029
113601
Actinomycetota
TAG
Leu
>WENV180180311
OAWK01000057
144595
Actinomycetota
CAA
Leu
>WENV180180248
OAWK01000017
163764
Actinomycetota
TGG
Pro
>WENV180180269
OAWK01000029
235121
Actinomycetota
CGT
Thr
>WENV180180243
OAWK01000015
47164
Actinomycetota
GGA
Ser
>WENV180180244
OAWK01000017
17009
Actinomycetota
GAG
Leu
>WENV180180395
OAWK01000150
80622
Actinomycetota
CAG
Leu
>WENV180180239
OAWK01000015
356597
Actinomycetota
CTG
Gln
>WENV180180325
OAWK01000067
243162
Actinomycetota
GTT
Asn
>WENV180180259
OAWK01000024
144660
Actinomycetota
TAC
Val
>WENV180180290
OAWK01000045
95593
Actinomycetota
>WENV180180211
OAWK01000009
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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