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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180228066
OBBW01000035
270475
Bacillota
GAA
Phe
>WENV180228047
OBBW01000025
235507
Bacillota
GAA
Phe
>WENV180228050
OBBW01000028
235507
Bacillota
GAA
Phe
>WENV180228123
OBBW01000091
235507
Bacillota
GAA
Phe
>WENV180228162
OBBW01000173
235507
Bacillota
GAA
Phe
>WENV180228197
OBBW01000272
146699
Bacillota
TCG
Arg
>WENV180228133
OBBW01000107
18465
Bacillota
GCT
Ser
>WENV180228135
OBBW01000107
18465
Bacillota
GCT
Ser
>WENV180228088
OBBW01000049
80838
Bacillota
GTA
Tyr
>WENV180228203
OBBW01000358
80838
Bacillota
GTA
Tyr
>WENV180228057
OBBW01000032
37089
Bacillota
TAA
Leu
>WENV180228060
OBBW01000032
37089
Bacillota
TAA
Leu
>WENV180228136
OBBW01000107
146697
Bacillota
ACG
Arg
>WENV180228202
OBBW01000358
237285
Bacillota
TGT
Thr
>WENV180228087
OBBW01000049
237285
Bacillota
TGT
Thr
>WENV180228053
OBBW01000032
237285
Bacillota
TGT
Thr
>WENV180228118
OBBW01000083
237286
Bacillota
CTT
Lys
>WENV180228227
OBBW01000786
113680
Bacillota
TAG
Leu
>WENV180228252
OBBW01002902
412107
Bacillota
TCC
Gly
>WENV180228242
OBBW01001647
412107
Bacillota
TCC
Gly
>WENV180228120
OBBW01000083
412107
Bacillota
TCC
Gly
>WENV180228052
OBBW01000028
412107
Bacillota
TCC
Gly
>WENV180228049
OBBW01000028
80839
Bacillota
GAG
Leu
>WENV180228240
OBBW01001129
186380
Bacillota
GTC
Asp
>WENV180228148
OBBW01000129
186380
Bacillota
GTC
Asp
>WENV180228161
OBBW01000173
338550
Bacillota
>WENV180228059
OBBW01000032
146698
Bacillota
CAT
Met
>WENV180228056
OBBW01000032
146698
Bacillota
CAT
Met
>WENV180228054
OBBW01000032
39475
Bacillota
TAA
Leu
>WENV180228031
OBBW01000015
39475
Bacillota
TAA
Leu
>WENV180228164
OBBW01000173
258936
Bacillota
GGT
Thr
>WENV180228236
OBBW01000980
339364
Bacillota
TTG
Gln
>WENV180228205
OBBW01000360
339362
Bacillota
GTT
Asn
>WENV180228145
OBBW01000121
339362
Bacillota
GTT
Asn
>WENV180228061
OBBW01000032
339362
Bacillota
GTT
Asn
>WENV180228243
OBBW01001647
339363
Bacillota
GCC
Gly
>WENV180228228
OBBW01000786
339363
Bacillota
GCC
Gly
>WENV180228051
OBBW01000028
339363
Bacillota
GCC
Gly
>WENV180228235
OBBW01000980
237287
Bacillota
GTG
His
>WENV180227979
OBBW01000003
59079
Bacillota
CAA
Leu
>WENV180228239
OBBW01001129
237284
Bacillota
TAC
Val
>WENV180228204
OBBW01000358
237284
Bacillota
TAC
Val
>WENV180228147
OBBW01000129
237284
Bacillota
TAC
Val
>WENV180228138
OBBW01000107
23575
Bacillota
GGA
Ser
>WENV180228251
OBBW01002894
145469
Bacillota
TCT
Arg
>WENV180228234
OBBW01000980
145469
Bacillota
TCT
Arg
>WENV180228196
OBBW01000258
353527
Bacillota
TTC
Glu
>WENV180228146
OBBW01000129
353527
Bacillota
TTC
Glu
>WENV180228090
OBBW01000049
261708
Bacillota
CCA
Trp
>WENV180228134
OBBW01000107
16361
Bacillota
TGA
Ser
>WENV180228132
OBBW01000107
16361
Bacillota
TGA
Ser
>WENV180228089
OBBW01000049
237288
Bacillota
CCA
Trp
>WENV180228137
OBBW01000107
339361
Bacillota
CCT
Arg
>WENV180228222
OBBW01000755
292012
Bacillota
TGC
Ala
>WENV180228163
OBBW01000173
376360
Bacillota
GCA
Cys
>WENV180228032
OBBW01000016
376360
Bacillota
GCA
Cys
>WENV180228246
OBBW01002400
237283
Bacillota
TTT
Lys
>WENV180228237
OBBW01000980
237283
Bacillota
TTT
Lys
>WENV180228226
OBBW01000786
237283
Bacillota
TTT
Lys
>WENV180228208
OBBW01000390
237283
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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