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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180383897
OBOV01066891
245770
Gammaproteobacteria
TTT
Lys
>WENV180383720
OBOV01011310
245602
Gammaproteobacteria
TTT
Lys
>WENV180383876
OBOV01056825
237980
Gammaproteobacteria
GAA
Phe
>WENV180383858
OBOV01048479
45345
Gammaproteobacteria
GGA
Ser
>WENV180383652
OBOV01004481
239650
Gammaproteobacteria
TGT
Thr
>WENV180383740
OBOV01014670
44872
Gammaproteobacteria
GGA
Ser
>WENV180383654
OBOV01004481
412476
Gammaproteobacteria
TCC
Gly
>WENV180383902
OBOV01071163
145713
Gammaproteobacteria
CAT
Met
>WENV180383799
OBOV01027878
238433
Gammaproteobacteria
TTC
Glu
>WENV180383642
OBOV01003896
243485
Gammaproteobacteria
TGT
Thr
>WENV180383838
OBOV01038458
245151
Gammaproteobacteria
GTG
His
>WENV180383645
OBOV01003931
240536
Gammaproteobacteria
TTT
Lys
>WENV180383644
OBOV01003931
240536
Gammaproteobacteria
TTT
Lys
>WENV180383890
OBOV01061438
241212
Gammaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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