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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180403930
OBRT01051390
144612
Bacillota
TCT
Arg
>WENV180403703
OBRT01007621
235134
Bacillota
GAA
Phe
>WENV180403608
OBRT01002710
144577
Bacillota
GAT
Ile
>WENV180403717
OBRT01009141
307003
Bacillota
TGC
Ala
>WENV180404075
OBRT01111533
147639
Bacillota
ACG
Arg
>WENV180403757
OBRT01012850
239020
Bacillota
TTT
Lys
>WENV180403526
OBRT01001395
154766
Bacillota
GTC
Asp
>WENV180403486
OBRT01000829
154766
Bacillota
GTC
Asp
>WENV180404021
OBRT01083593
338147
Bacillota
CTC
Glu
>WENV180403824
OBRT01024019
235114
Bacillota
TTT
Lys
>WENV180404000
OBRT01075633
11034
Bacillota
GGA
Ser
>WENV180403607
OBRT01002710
235087
Bacillota
TGC
Ala
>WENV180403950
OBRT01059456
338149
Bacillota
CTC
Glu
>WENV180403928
OBRT01051063
245298
Bacillota
CGG
Pro
>WENV180403822
OBRT01024019
144610
Bacillota
GTG
His
>WENV180403704
OBRT01007621
240017
Bacillota
GCC
Gly
>WENV180403927
OBRT01051063
411547
Bacillota
CTG
Gln
>WENV180404035
OBRT01095756
4624
Bacillota
GCT
Ser
>WENV180403820
OBRT01023567
37307
Bacillota
TGA
Ser
>WENV180404017
OBRT01082610
148188
Bacillota
CCG
Arg
>WENV180403451
OBRT01000351
286963
Bacillota
CTT
Lys
>WENV180403657
OBRT01004801
157838
Bacillota
GTC
Asp
>WENV180404053
OBRT01102572
144652
Bacillota
GTC
Asp
>WENV180404020
OBRT01083356
311192
Bacillota
TGC
Ala
>WENV180403951
OBRT01059456
144621
Bacillota
GTT
Asn
>WENV180403974
OBRT01065466
235113
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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