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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180403396
OBRT01000088
95987
Bacteroidota
CAA
Leu
>WENV180403650
OBRT01004418
95987
Bacteroidota
CAA
Leu
>WENV180403331
OBRT01000002
141635
Bacteroidota
TAC
Val
>WENV180403356
OBRT01000027
141635
Bacteroidota
TAC
Val
>WENV180403334
OBRT01000002
339412
Bacteroidota
GGT
Thr
>WENV180403359
OBRT01000029
237796
Bacteroidota
CGT
Thr
>WENV180403469
OBRT01000675
237796
Bacteroidota
CGT
Thr
>WENV180403429
OBRT01000252
97336
Bacteroidota
CAG
Leu
>WENV180403440
OBRT01000315
394247
Bacteroidota
CTC
Glu
>WENV180403441
OBRT01000315
394247
Bacteroidota
CTC
Glu
>WENV180403721
OBRT01009310
394247
Bacteroidota
CTC
Glu
>WENV180404086
OBRT01117578
394247
Bacteroidota
CTC
Glu
>WENV180404097
OBRT01119254
413663
Bacteroidota
CTG
Gln
>WENV180403642
OBRT01003797
413663
Bacteroidota
CTG
Gln
>WENV180404087
OBRT01117633
136244
Bacteroidota
TAC
Val
>WENV180403654
OBRT01004704
136244
Bacteroidota
TAC
Val
>WENV180403676
OBRT01005597
237797
Bacteroidota
CCA
Trp
>WENV180403627
OBRT01003225
237797
Bacteroidota
CCA
Trp
>WENV180403434
OBRT01000297
144695
Bacteroidota
CAT
Met
>WENV180403397
OBRT01000090
238811
Bacteroidota
CAT
Met
>WENV180403515
OBRT01001213
412479
Bacteroidota
TTG
Gln
>WENV180404091
OBRT01117832
147147
Bacteroidota
GTG
His
>WENV180403576
OBRT01002047
147147
Bacteroidota
GTG
His
>WENV180403353
OBRT01000014
147147
Bacteroidota
GTG
His
>WENV180403349
OBRT01000008
147147
Bacteroidota
GTG
His
>WENV180403413
OBRT01000135
155123
Bacteroidota
GTT
Asn
>WENV180403865
OBRT01033963
238810
Bacteroidota
CGG
Pro
>WENV180403403
OBRT01000096
37076
Bacteroidota
TAA
Leu
>WENV180403384
OBRT01000060
37076
Bacteroidota
TAA
Leu
>WENV180403347
OBRT01000005
37076
Bacteroidota
TAA
Leu
>WENV180403867
OBRT01034763
141414
Bacteroidota
GGG
Pro
>WENV180403559
OBRT01001780
251266
Bacteroidota
CTT
Lys
>WENV180403415
OBRT01000143
339634
Bacteroidota
CCT
Arg
>WENV180403467
OBRT01000629
412235
Bacteroidota
>WENV180403458
OBRT01000456
339996
Bacteroidota
TTC
Glu
>WENV180403632
OBRT01003441
147148
Bacteroidota
CAT
Met
>WENV180403414
OBRT01000136
415558
Bacteroidota
TTG
Gln
>WENV180404094
OBRT01117923
175704
Bacteroidota
TGC
Ala
>WENV180403876
OBRT01037805
175704
Bacteroidota
TGC
Ala
>WENV180403586
OBRT01002379
95986
Bacteroidota
GTA
Tyr
>WENV180403435
OBRT01000303
196394
Bacteroidota
GTC
Asp
>WENV180403355
OBRT01000019
196394
Bacteroidota
GTC
Asp
>WENV180403354
OBRT01000019
196394
Bacteroidota
GTC
Asp
>WENV180404013
OBRT01081651
196394
Bacteroidota
GTC
Asp
>WENV180403644
OBRT01003977
196394
Bacteroidota
GTC
Asp
>WENV180403464
OBRT01000498
412236
Bacteroidota
CCC
Gly
>WENV180403593
OBRT01002448
59498
Bacteroidota
GAG
Leu
>WENV180403407
OBRT01000108
59498
Bacteroidota
GAG
Leu
>WENV180403624
OBRT01003118
313363
Bacteroidota
GAA
Phe
>WENV180403492
OBRT01000844
313363
Bacteroidota
GAA
Phe
>WENV180403438
OBRT01000314
313363
Bacteroidota
GAA
Phe
>WENV180403387
OBRT01000066
313363
Bacteroidota
GAA
Phe
>WENV180403378
OBRT01000046
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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