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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180409770
OBUV01001252
144589
Actinomycetota
ACG
Arg
>WENV180409742
OBUV01000322
305322
Actinomycetota
TGC
Ala
>WENV180409760
OBUV01000745
235848
Actinomycetota
TTT
Lys
>WENV180409764
OBUV01000996
145423
Actinomycetota
TCT
Arg
>WENV180409777
OBUV01002228
198659
Actinomycetota
TAC
Val
>WENV180409765
OBUV01001013
45154
Actinomycetota
TGA
Ser
>WENV180409776
OBUV01002220
254857
Actinomycetota
CCG
Arg
>WENV180409792
OBUV01003596
295695
Actinomycetota
CTC
Glu
>WENV180409761
OBUV01000757
98279
Actinomycetota
GTA
Tyr
>WENV180409793
OBUV01003596
338148
Actinomycetota
CTG
Gln
>WENV180409763
OBUV01000865
235148
Actinomycetota
GTT
Asn
>WENV180409740
OBUV01000246
411554
Actinomycetota
CCC
Gly
>WENV180409772
OBUV01001695
113601
Actinomycetota
TAG
Leu
>WENV180409749
OBUV01000396
235149
Actinomycetota
CCT
Arg
>WENV180409768
OBUV01001095
91808
Actinomycetota
CAG
Leu
>WENV180409789
OBUV01002489
145269
Actinomycetota
CAT
Met
>WENV180409751
OBUV01000409
147225
Actinomycetota
CAA
Leu
>WENV180409771
OBUV01001695
235121
Actinomycetota
CGT
Thr
>WENV180409787
OBUV01002316
393408
Actinomycetota
TTC
Glu
>WENV180409791
OBUV01003208
235173
Actinomycetota
GGC
Ala
>WENV180409759
OBUV01000565
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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