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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180462179
OBYB01000365
246260
Verrucomicrobiota
>WENV180462313
OBYB01001066
119661
Verrucomicrobiota
CAA
Leu
>WENV180462111
OBYB01000183
344841
Verrucomicrobiota
CAC
Val
>WENV180462217
OBYB01000550
60880
Verrucomicrobiota
CAG
Leu
>WENV180462419
OBYB01002199
170105
Verrucomicrobiota
CAT
Met
>WENV180462164
OBYB01000322
345115
Verrucomicrobiota
CAT
Met
>WENV180462078
OBYB01000155
246709
Verrucomicrobiota
CAT
Met
>WENV180462265
OBYB01000802
287733
Verrucomicrobiota
CCA
Trp
>WENV180462198
OBYB01000436
414625
Verrucomicrobiota
CCC
Gly
>WENV180462389
OBYB01001822
345142
Verrucomicrobiota
CCG
Arg
>WENV180462427
OBYB01002307
345110
Verrucomicrobiota
CCT
Arg
>WENV180462218
OBYB01000552
7274
Verrucomicrobiota
CGA
Ser
>WENV180462155
OBYB01000296
246687
Verrucomicrobiota
CGC
Ala
>WENV180462261
OBYB01000755
155268
Verrucomicrobiota
CGG
Pro
>WENV180462241
OBYB01000622
344842
Verrucomicrobiota
CGT
Thr
>WENV180462258
OBYB01000726
344845
Verrucomicrobiota
CTG
Gln
>WENV180462242
OBYB01000622
246677
Verrucomicrobiota
CTT
Lys
>WENV180462160
OBYB01000314
246728
Verrucomicrobiota
GAA
Phe
>WENV180462553
OBYB01007526
345133
Verrucomicrobiota
GAC
Val
>WENV180462283
OBYB01000918
344844
Verrucomicrobiota
GCA
Cys
>WENV180462444
OBYB01002602
368497
Verrucomicrobiota
GCC
Gly
>WENV180462405
OBYB01001971
368497
Verrucomicrobiota
GCC
Gly
>WENV180462149
OBYB01000289
7256
Verrucomicrobiota
GCT
Ser
>WENV180462199
OBYB01000437
155264
Verrucomicrobiota
GGG
Pro
>WENV180462334
OBYB01001275
344751
Verrucomicrobiota
GGT
Thr
>WENV180462293
OBYB01000949
82054
Verrucomicrobiota
GTA
Tyr
>WENV180462325
OBYB01001197
128202
Verrucomicrobiota
GTC
Asp
>WENV180462077
OBYB01000155
344839
Verrucomicrobiota
GTG
His
>WENV180462245
OBYB01000641
345124
Verrucomicrobiota
GTT
Asn
>WENV180462178
OBYB01000365
82056
Verrucomicrobiota
TAA
Leu
>WENV180462237
OBYB01000616
345119
Verrucomicrobiota
TAC
Val
>WENV180462186
OBYB01000394
97755
Verrucomicrobiota
TAG
Leu
>WENV180462379
OBYB01001642
155256
Verrucomicrobiota
TCT
Arg
>WENV180462252
OBYB01000720
46246
Verrucomicrobiota
TGA
Ser
>WENV180462161
OBYB01000314
154693
Verrucomicrobiota
TGG
Pro
>WENV180462378
OBYB01001638
345123
Verrucomicrobiota
TGT
Thr
>WENV180462284
OBYB01000918
246700
Verrucomicrobiota
TTC
Glu
>WENV180462076
OBYB01000155
246700
Verrucomicrobiota
TTC
Glu
>WENV180462115
OBYB01000191
345141
Verrucomicrobiota
TTG
Gln
>WENV180462191
OBYB01000422
246701
Verrucomicrobiota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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