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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180463539
OBYC01002186
235146
Actinomycetota
CGT
Thr
>WENV180463524
OBYC01002019
235347
Actinomycetota
GGC
Ala
>WENV180463523
OBYC01001993
201717
Actinomycetota
CTT
Lys
>WENV180463587
OBYC01003442
144600
Actinomycetota
TGG
Pro
>WENV180463593
OBYC01003662
235194
Actinomycetota
GTG
His
>WENV180463581
OBYC01003204
158720
Actinomycetota
ACG
Arg
>WENV180463665
OBYC01009372
411601
Actinomycetota
CCC
Gly
>WENV180463604
OBYC01004181
144826
Actinomycetota
GGG
Pro
>WENV180463583
OBYC01003259
23370
Actinomycetota
GCT
Ser
>WENV180463557
OBYC01002596
174149
Actinomycetota
GAT
Ile
>WENV180463635
OBYC01006870
338239
Actinomycetota
TTC
Glu
>WENV180463558
OBYC01002596
235174
Actinomycetota
TGC
Ala
>WENV180463579
OBYC01003090
121510
Actinomycetota
TAA
Leu
>WENV180463637
OBYC01007184
356045
Actinomycetota
GAC
Val
>WENV180463715
OBYC01017345
44855
Actinomycetota
TGA
Ser
>WENV180463638
OBYC01007184
235199
Actinomycetota
CAC
Val
>WENV180463617
OBYC01005221
44862
Actinomycetota
CGA
Ser
>WENV180463575
OBYC01003028
313386
Actinomycetota
CGT
Thr
>WENV180463493
OBYC01001392
367535
Actinomycetota
CTG
Gln
>WENV180463602
OBYC01004126
413665
Actinomycetota
TTG
Gln
>WENV180463615
OBYC01005062
144700
Actinomycetota
CAT
Met
>WENV180463492
OBYC01001392
295695
Actinomycetota
CTC
Glu
>WENV180463590
OBYC01003447
235148
Actinomycetota
GTT
Asn
>WENV180463589
OBYC01003447
235148
Actinomycetota
GTT
Asn
>WENV180463588
OBYC01003447
235148
Actinomycetota
GTT
Asn
>WENV180463453
OBYC01001085
53078
Actinomycetota
GGA
Ser
>WENV180463613
OBYC01004888
235348
Actinomycetota
CCT
Arg
>WENV180463576
OBYC01003028
113601
Actinomycetota
TAG
Leu
>WENV180463502
OBYC01001474
144595
Actinomycetota
CAA
Leu
>WENV180463693
OBYC01012902
17009
Actinomycetota
GAG
Leu
>WENV180463649
OBYC01008386
80622
Actinomycetota
CAG
Leu
>WENV180463528
OBYC01002063
144660
Actinomycetota
TAC
Val
>WENV180463800
OBYC01040147
95593
Actinomycetota
>WENV180463614
OBYC01005062
95593
Actinomycetota
>WENV180463517
OBYC01001844
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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