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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180477580
OBYZ01002113
235146
Actinomycetota
CGT
Thr
>WENV180477659
OBYZ01004649
235347
Actinomycetota
GGC
Ala
>WENV180477588
OBYZ01002189
166493
Actinomycetota
CTT
Lys
>WENV180477737
OBYZ01008304
144589
Actinomycetota
ACG
Arg
>WENV180477738
OBYZ01008304
144589
Actinomycetota
ACG
Arg
>WENV180477777
OBYZ01010613
144589
Actinomycetota
ACG
Arg
>WENV180477653
OBYZ01004272
144600
Actinomycetota
TGG
Pro
>WENV180477599
OBYZ01002356
235194
Actinomycetota
GTG
His
>WENV180477436
OBYZ01000785
273786
Actinomycetota
CGT
Thr
>WENV180477630
OBYZ01003396
411601
Actinomycetota
CCC
Gly
>WENV180477605
OBYZ01002403
23370
Actinomycetota
GCT
Ser
>WENV180477495
OBYZ01001059
174149
Actinomycetota
GAT
Ile
>WENV180477494
OBYZ01001030
162208
Actinomycetota
TAC
Val
>WENV180477496
OBYZ01001059
235174
Actinomycetota
TGC
Ala
>WENV180477243
OBYZ01000354
235174
Actinomycetota
TGC
Ala
>WENV180477421
OBYZ01000728
235101
Actinomycetota
TTT
Lys
>WENV180477702
OBYZ01005773
121510
Actinomycetota
TAA
Leu
>WENV180477950
OBYZ01056736
356045
Actinomycetota
GAC
Val
>WENV180477616
OBYZ01002710
145423
Actinomycetota
TCT
Arg
>WENV180477658
OBYZ01004516
44855
Actinomycetota
TGA
Ser
>WENV180477672
OBYZ01005131
235199
Actinomycetota
CAC
Val
>WENV180477537
OBYZ01001335
44862
Actinomycetota
CGA
Ser
>WENV180477720
OBYZ01006771
413665
Actinomycetota
TTG
Gln
>WENV180477551
OBYZ01001633
254857
Actinomycetota
CCG
Arg
>WENV180477839
OBYZ01020647
144700
Actinomycetota
CAT
Met
>WENV180477466
OBYZ01000943
44942
Actinomycetota
TGA
Ser
>WENV180477304
OBYZ01000442
98279
Actinomycetota
GTA
Tyr
>WENV180477762
OBYZ01010252
338148
Actinomycetota
CTG
Gln
>WENV180477635
OBYZ01003539
235148
Actinomycetota
GTT
Asn
>WENV180477751
OBYZ01009456
144825
Actinomycetota
CAT
Met
>WENV180477598
OBYZ01002334
145347
Actinomycetota
CAA
Leu
>WENV180477434
OBYZ01000761
235348
Actinomycetota
CCT
Arg
>WENV180477303
OBYZ01000442
16467
Actinomycetota
GCT
Ser
>WENV180477510
OBYZ01001123
411554
Actinomycetota
CCC
Gly
>WENV180477437
OBYZ01000785
113601
Actinomycetota
TAG
Leu
>WENV180477647
OBYZ01004107
144595
Actinomycetota
CAA
Leu
>WENV180477664
OBYZ01004800
145343
Actinomycetota
GGG
Pro
>WENV180477470
OBYZ01000957
235149
Actinomycetota
CCT
Arg
>WENV180477533
OBYZ01001288
145269
Actinomycetota
CAT
Met
>WENV180477626
OBYZ01003132
235121
Actinomycetota
CGT
Thr
>WENV180477471
OBYZ01000967
144635
Actinomycetota
TGG
Pro
>WENV180477420
OBYZ01000726
119485
Actinomycetota
TAA
Leu
>WENV180477463
OBYZ01000918
16222
Actinomycetota
GAG
Leu
>WENV180477652
OBYZ01004260
235173
Actinomycetota
GGC
Ala
>WENV180477244
OBYZ01000354
235173
Actinomycetota
GGC
Ala
>WENV180477797
OBYZ01013350
243162
Actinomycetota
GTT
Asn
>WENV180477655
OBYZ01004365
243162
Actinomycetota
GTT
Asn
>WENV180477587
OBYZ01002179
144660
Actinomycetota
TAC
Val
>WENV180477554
OBYZ01001680
278447
Actinomycetota
GTG
His
>WENV180477803
OBYZ01014827
95593
Actinomycetota
>WENV180477541
OBYZ01001421
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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