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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180487339
OBZO01000212
235146
Actinomycetota
CGT
Thr
>WENV180487313
OBZO01000156
235347
Actinomycetota
GGC
Ala
>WENV180487314
OBZO01000156
235347
Actinomycetota
GGC
Ala
>WENV180487207
OBZO01000050
166493
Actinomycetota
CTT
Lys
>WENV180487223
OBZO01000063
166750
Actinomycetota
CAT
Met
>WENV180487336
OBZO01000211
144600
Actinomycetota
TGG
Pro
>WENV180487222
OBZO01000061
235194
Actinomycetota
GTG
His
>WENV180487278
OBZO01000097
158720
Actinomycetota
ACG
Arg
>WENV180487277
OBZO01000097
158720
Actinomycetota
ACG
Arg
>WENV180487307
OBZO01000149
411601
Actinomycetota
CCC
Gly
>WENV180487242
OBZO01000065
144826
Actinomycetota
GGG
Pro
>WENV180487259
OBZO01000084
23370
Actinomycetota
GCT
Ser
>WENV180487367
OBZO01000431
338239
Actinomycetota
TTC
Glu
>WENV180487376
OBZO01000522
235174
Actinomycetota
TGC
Ala
>WENV180487206
OBZO01000050
235101
Actinomycetota
TTT
Lys
>WENV180487193
OBZO01000043
121510
Actinomycetota
TAA
Leu
>WENV180487317
OBZO01000162
44855
Actinomycetota
TGA
Ser
>WENV180487240
OBZO01000065
235199
Actinomycetota
CAC
Val
>WENV180487227
OBZO01000063
235199
Actinomycetota
CAC
Val
>WENV180487298
OBZO01000114
44862
Actinomycetota
CGA
Ser
>WENV180487312
OBZO01000156
413665
Actinomycetota
TTG
Gln
>WENV180487224
OBZO01000063
254857
Actinomycetota
CCG
Arg
>WENV180487258
OBZO01000084
144700
Actinomycetota
CAT
Met
>WENV180487204
OBZO01000050
243671
Actinomycetota
CTC
Glu
>WENV180487205
OBZO01000050
338148
Actinomycetota
CTG
Gln
>WENV180487248
OBZO01000074
144825
Actinomycetota
CAT
Met
>WENV180487249
OBZO01000074
235348
Actinomycetota
CCT
Arg
>WENV180487338
OBZO01000212
113601
Actinomycetota
TAG
Leu
>WENV180487194
OBZO01000043
144595
Actinomycetota
CAA
Leu
>WENV180487337
OBZO01000212
235121
Actinomycetota
CGT
Thr
>WENV180487208
OBZO01000050
47164
Actinomycetota
GGA
Ser
>WENV180487365
OBZO01000321
80622
Actinomycetota
CAG
Leu
>WENV180487368
OBZO01000431
147734
Actinomycetota
GTC
Asp
>WENV180487316
OBZO01000158
147734
Actinomycetota
GTC
Asp
>WENV180487250
OBZO01000079
16222
Actinomycetota
GAG
Leu
>WENV180487310
OBZO01000150
243162
Actinomycetota
GTT
Asn
>WENV180487309
OBZO01000150
243162
Actinomycetota
GTT
Asn
>WENV180487308
OBZO01000150
243162
Actinomycetota
GTT
Asn
>WENV180487276
OBZO01000095
144660
Actinomycetota
TAC
Val
>WENV180487257
OBZO01000084
95593
Actinomycetota
>WENV180487221
OBZO01000061
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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