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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180499101
OCAH01000051
235097
Bacteroidota
TTT
Lys
>WENV180499409
OCAH01008935
235097
Bacteroidota
TTT
Lys
>WENV180499309
OCAH01001026
235102
Bacteroidota
CGT
Thr
>WENV180499212
OCAH01000243
144657
Bacteroidota
CGG
Pro
>WENV180499090
OCAH01000043
339341
Bacteroidota
GGT
Thr
>WENV180499081
OCAH01000031
58715
Bacteroidota
GAG
Leu
>WENV180499034
OCAH01000003
46165
Bacteroidota
TGA
Ser
>WENV180499147
OCAH01000111
338486
Bacteroidota
CAT
Met
>WENV180499138
OCAH01000093
338486
Bacteroidota
CAT
Met
>WENV180499085
OCAH01000032
59689
Bacteroidota
CAG
Leu
>WENV180499080
OCAH01000031
59689
Bacteroidota
CAG
Leu
>WENV180499273
OCAH01000557
436206
Bacteroidota
TTG
Gln
>WENV180499083
OCAH01000032
20893
Bacteroidota
GGA
Ser
>WENV180499035
OCAH01000003
20893
Bacteroidota
GGA
Ser
>WENV180499189
OCAH01000196
338124
Bacteroidota
CCG
Arg
>WENV180499193
OCAH01000199
235203
Bacteroidota
TTT
Lys
>WENV180499102
OCAH01000052
235203
Bacteroidota
TTT
Lys
>WENV180499032
OCAH01000003
238121
Bacteroidota
CTT
Lys
>WENV180499031
OCAH01000003
238121
Bacteroidota
CTT
Lys
>WENV180499186
OCAH01000192
338132
Bacteroidota
GCA
Cys
>WENV180499033
OCAH01000003
45423
Bacteroidota
TGA
Ser
>WENV180499206
OCAH01000229
193809
Bacteroidota
CAT
Met
>WENV180499040
OCAH01000009
58714
Bacteroidota
CAA
Leu
>WENV180499399
OCAH01004430
301449
Bacteroidota
CGG
Pro
>WENV180499347
OCAH01001525
144656
Bacteroidota
GTG
His
>WENV180499198
OCAH01000211
235207
Bacteroidota
CAT
Met
>WENV180499116
OCAH01000073
144659
Bacteroidota
GTG
His
>WENV180499115
OCAH01000073
144659
Bacteroidota
GTG
His
>WENV180499213
OCAH01000243
235180
Bacteroidota
CCA
Trp
>WENV180499354
OCAH01001651
80607
Bacteroidota
GTA
Tyr
>WENV180499289
OCAH01000806
80607
Bacteroidota
GTA
Tyr
>WENV180499129
OCAH01000087
80607
Bacteroidota
GTA
Tyr
>WENV180499170
OCAH01000152
113604
Bacteroidota
>WENV180499167
OCAH01000152
113604
Bacteroidota
>WENV180499104
OCAH01000054
80614
Bacteroidota
>WENV180499095
OCAH01000045
80614
Bacteroidota
>WENV180499294
OCAH01000822
144590
Bacteroidota
GTT
Asn
>WENV180499293
OCAH01000822
144590
Bacteroidota
GTT
Asn
>WENV180499266
OCAH01000495
95559
Bacteroidota
TAG
Leu
>WENV180499349
OCAH01001551
419272
Bacteroidota
CTG
Gln
>WENV180499251
OCAH01000401
144655
Bacteroidota
GGC
Ala
>WENV180499028
OCAH01000001
338164
Bacteroidota
TTC
Glu
>WENV180499027
OCAH01000001
338164
Bacteroidota
TTC
Glu
>WENV180499041
OCAH01000009
95875
Bacteroidota
TAG
Leu
>WENV180499285
OCAH01000750
139743
Bacteroidota
GGG
Pro
>WENV180499100
OCAH01000051
139743
Bacteroidota
GGG
Pro
>WENV180499099
OCAH01000050
139743
Bacteroidota
GGG
Pro
>WENV180499044
OCAH01000012
240012
Bacteroidota
CCC
Gly
>WENV180499248
OCAH01000372
44852
Bacteroidota
TAA
Leu
>WENV180499043
OCAH01000012
147439
Bacteroidota
TCT
Arg
>WENV180499152
OCAH01000125
411550
Bacteroidota
CTG
Gln
>WENV180499151
OCAH01000125
411550
Bacteroidota
CTG
Gln
>WENV180499046
OCAH01000013
185921
Bacteroidota
GTC
Asp
>WENV180499045
OCAH01000013
185921
Bacteroidota
GTC
Asp
>WENV180499144
OCAH01000107
23696
Bacteroidota
GCT
Ser
>WENV180499355
OCAH01001659
55270
Bacteroidota
TGA
Ser
>WENV180499318
OCAH01001107
55270
Bacteroidota
TGA
Ser
>WENV180499255
OCAH01000424
55270
Bacteroidota
TGA
Ser
>WENV180499150
OCAH01000123
16224
Bacteroidota
GGA
Ser
>WENV180499173
OCAH01000157
16220
Bacteroidota
GGA
Ser
>WENV180499075
OCAH01000028
338125
Bacteroidota
CCT
Arg
>WENV180499079
OCAH01000031
235129
Bacteroidota
GCC
Gly
>WENV180499062
OCAH01000022
235129
Bacteroidota
GCC
Gly
>WENV180499060
OCAH01000022
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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